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    LOC556989 myosin-IIIb [ Danio rerio (zebrafish) ]

    Gene ID: 556989, updated on 27-Mar-2024

    Summary

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    Gene symbol
    LOC556989
    Gene description
    myosin-IIIb
    See related
    Ensembl:ENSDARG00000058946
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Orthologs
    all
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    Genomic context

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    See LOC556989 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    30
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 10 NC_007121.7 (2600739..2669206)
    105 previous assembly GRCz10 (GCF_000002035.5) 10 NC_007121.6 (2572864..2641607)

    Chromosome 10 - NC_007121.7Genomic Context describing neighboring genes Neighboring gene nucleoredoxin like 2 Neighboring gene tissue factor pathway inhibitor-like Neighboring gene chemokine (C-C motif) ligand 27b Neighboring gene pyridoxal (pyridoxine, vitamin B6) phosphatase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    myosin-IIIb

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007121.7 Reference GRCz11 Primary Assembly

      Range
      2600739..2669206
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005172588.4 → XP_005172645.1  myosin-IIIb isoform X2

      UniProtKB/TrEMBL
      A0A8M2BJU2
      Conserved Domains (3) summary
      smart00242
      Location:34 → 711
      MYSc; Myosin. Large ATPases
      cd14889
      Location:53 → 711
      MYSc_Myo28; class XXVIII myosin, motor domain
      cl15255
      Location:895 → 992
      SH2; Src homology 2 (SH2) domain

    2. XM_679943.7 → XP_685035.4  myosin-IIIb isoform X1

      UniProtKB/TrEMBL
      A0A8N7T6I8
      Related
      ENSDARP00000091785.5, ENSDART00000101012.6
      Conserved Domains (3) summary
      smart00242
      Location:34 → 711
      MYSc; Myosin. Large ATPases
      cd14889
      Location:53 → 711
      MYSc_Myo28; class XXVIII myosin, motor domain
      cl15255
      Location:895 → 992
      SH2; Src homology 2 (SH2) domain
    Nucleotide Protein Strain
    Heading Accession and Version

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