These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

1. NM_001113225.2 → NP_001106696.2  ligand of Numb protein X 2a

   Status: VALIDATED

   Source sequence(s)

   BG305543, BX571696, DT867995, EB950577, EB957408, EH583415, FJ156085

   UniProtKB/TrEMBL

   A0A8M1NFK9, B6DRF5, F1R5N4

   Related

   ENSDARP00000046210.5, ENSDART00000046211.8

   Conserved Domains (3) summary

   smart00228
   Location:267 → 353

   PDZ; Domain present in PSD-95, Dlg, and ZO-1/2

   cd00992
   Location:646 → 730

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

   pfam13639
   Location:49 → 87

   zf-RING_2; Ring finger domain

The following sections contain reference sequences that belong to a specific genome build. Explain

This section includes genomic Reference Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate assemblies. Model RNAs and proteins are also reported here.

Reference GRCz11 Primary Assembly

Genomic

1. NC_007135.7 Reference GRCz11 Primary Assembly

   Range

   21646264..21674999 complement

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

1. XM_021470169.1 → XP_021325844.1  ligand of Numb protein X 2 isoform X1

   UniProtKB/TrEMBL

   A0A8M9PLS6, B6DRF5

   Conserved Domains (1) summary

   cd00992
   Location:537 → 621

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

2. XM_021470170.1 → XP_021325845.1  ligand of Numb protein X 2 isoform X2

   UniProtKB/TrEMBL

   A0A8M9PXH3

   Conserved Domains (1) summary

   cd00992
   Location:496 → 580

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

3. XM_021470171.1 → XP_021325846.1  ligand of Numb protein X 2 isoform X3

   UniProtKB/TrEMBL

   A0A8M9PU28

   Conserved Domains (5) summary

   smart00228
   Location:267 → 353

   PDZ; Domain present in PSD-95, Dlg, and ZO-1/2

   cd00992
   Location:375 → 455

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

   cd16780
   Location:44 → 88

   mRING-HC-C3HC3D_LNX2; Modified RING finger, HC subclass (C3HC3D-type), found in ligand of numb protein X 2 (LNX2)

   cl00117
   Location:515 → 565

   PDZ; PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif). Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. ...

   cl26688
   Location:44 → 201

   DWNN; DWNN domain

Reference GRCz11 ALT_DRER_TU_1

Genomic

1. NW_018395171.1 Reference GRCz11 ALT_DRER_TU_1

   Range

   316958..344056 complement

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)