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    TVAGG3_0292740 gene silencing by RNA [ Trichomonas vaginalis G3 ]

    Gene ID: 5468441, updated on 17-May-2024

    Summary

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    Gene symbol
    TVAGG3_0292740
    Gene description
    gene silencing by RNA
    Primary source
    TrichDB:TVAGG3_0292740
    Locus tag
    TVAGG3_0292740
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Trichomonas vaginalis G3 (strain: G3, nat-host: Homo sapiens, culture-collection: ATCC:PRA-98)
    Lineage
    Eukaryota; Metamonada; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas
    Old locus tag
    TVAG_2v0292740
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    Genomic context

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    See TVAGG3_0292740 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    1
    Sequence:
    Chromosome: V; NC_067207.1 (7124236..7125504)

    Chromosome V - NC_067207.1Genomic Context describing neighboring genes Neighboring gene aminophospholipid transmembrane transporter protein Neighboring gene Ankyrin repeat family Neighboring gene hypothetical protein Neighboring gene RNA polymerase II transcription regulator recruiting protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_067207.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Draft genome sequence of the sexually transmitted pathogen Trichomonas vaginalis. Carlton JM, et al. Science, 2007 Jan 12. PMID 17218520, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    • replaces TrichDB:TVAG_076290

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in mRNA catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of CCR4-NOT complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    gene silencing by RNA
    XP_001583868.1
    • eggNOG seed ortholog:5722.XP_001583868.1;replaces TrichDB:TVAG_076290

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_067207.1 Reference assembly

      Range
      7124236..7125504
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001583818.1 → XP_001583868.1  gene silencing by RNA [Trichomonas vaginalis G3]

      See identical proteins and their annotated locations for XP_001583868.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A2D9M6
      Conserved Domains (1) summary
      pfam10155
      Location:277 → 398
      DUF2363; Uncharacterized conserved protein (DUF2363)
    Nucleotide Protein
    Heading Accession and Version

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