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    LBRM_35_5420 vacuolar protein sorting-associated protein-like protein [ Leishmania braziliensis MHOM/BR/75/M2904 ]

    Gene ID: 5420137, updated on 28-Dec-2023

    Summary

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    Gene symbol
    LBRM_35_5420
    Gene description
    vacuolar protein sorting-associated protein-like protein
    Locus tag
    LBRM_35_5420
    Gene type
    protein coding
    RNA name
    vacuolar protein sorting-associated protein-like protein
    RefSeq status
    PROVISIONAL
    Organism
    Leishmania braziliensis MHOM/BR/75/M2904 (strain: MHOM/BR/75/M2904)
    Lineage
    Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania braziliensis species complex
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    Genomic context

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    Location:
    chromosome: 36
    Exon count:
    1
    Sequence:
    Chromosome: 36; NC_009327.2 (1990659..1991288, complement)

    Chromosome 36 - NC_009327.2Genomic Context describing neighboring genes Neighboring gene conserved hypothetical protein Neighboring gene conserved hypothetical protein Neighboring gene putative aldehyde dehydrogenase Neighboring gene putative helicase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009327.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comparative genomic analysis of three Leishmania species that cause diverse human disease. Peacock CS, et al. Nat Genet, 2007 Jul. PMID 17572675, Free PMC Article
    2. Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania. Rogers MB, et al. Genome Res, 2011 Dec. PMID 22038252, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein-containing complex binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of ESCRT I complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    vacuolar protein sorting-associated protein-like protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_009327.2 Reference assembly

      Range
      1990659..1991288 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001569108.2 → XP_001569158.1  vacuolar protein sorting-associated protein-like protein [Leishmania braziliensis MHOM/BR/75/M2904]

      See identical proteins and their annotated locations for XP_001569158.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A3P3ZJC2, A4HQ33
      Conserved Domains (1) summary
      pfam03997
      Location:17 → 199
      VPS28; VPS28 protein
    Nucleotide Protein
    Heading Accession and Version

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