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    ARFGAP1 ADP ribosylation factor GTPase activating protein 1 [ Oryx dammah (scimitar-horned oryx) ]

    Gene ID: 120868822, updated on 21-Mar-2024

    Summary

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    Gene symbol
    ARFGAP1
    Gene description
    ADP ribosylation factor GTPase activating protein 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryx dammah
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Hippotraginae; Oryx
    Orthologs
    human mouse all
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    Genomic context

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    See ARFGAP1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    100 current SCBI_Odam_1.1 (GCF_014754425.2) Unplaced Scaffold NW_024070194.1 (29040398..29050569)

    NW_024070194.1Genomic Context describing neighboring genes Neighboring gene YTH N6-methyladenosine RNA binding protein F1 Neighboring gene baculoviral IAP repeat containing 7 Neighboring gene collagen type XX alpha 1 chain Neighboring gene cholinergic receptor nicotinic alpha 4 subunit

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_024070194 Unplaced Scaffold Reference SCBI_Odam_1.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTPase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of ARF protein signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of endocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ADP-ribosylation factor GTPase-activating protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Oryx dammah Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference SCBI_Odam_1.1 Primary Assembly

    Genomic

    1. NW_024070194.1 Reference SCBI_Odam_1.1 Primary Assembly

      Range
      29040398..29050569
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040247695.1 → XP_040103629.1  ADP-ribosylation factor GTPase-activating protein 1 isoform X2

      Conserved Domains (2) summary
      COG5347
      Location:2 → 255
      COG5347; GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport [Intracellular trafficking and secretion]
      cd08830
      Location:6 → 121
      ArfGap_ArfGap1; Arf1 GTPase-activating protein 1

    2. XM_040247693.1 → XP_040103627.1  ADP-ribosylation factor GTPase-activating protein 1 isoform X1

      Conserved Domains (1) summary
      cd08830
      Location:6 → 121
      ArfGap_ArfGap1; Arf1 GTPase-activating protein 1

    3. XM_040247696.1 → XP_040103630.1  ADP-ribosylation factor GTPase-activating protein 1 isoform X3

      Conserved Domains (1) summary
      cd08830
      Location:6 → 121
      ArfGap_ArfGap1; Arf1 GTPase-activating protein 1

    4. XM_040247697.1 → XP_040103631.1  ADP-ribosylation factor GTPase-activating protein 1 isoform X4

      Conserved Domains (1) summary
      cd08830
      Location:6 → 121
      ArfGap_ArfGap1; Arf1 GTPase-activating protein 1

    5. XM_040247698.1 → XP_040103632.1  ADP-ribosylation factor GTPase-activating protein 1 isoform X5

      Conserved Domains (2) summary
      COG5347
      Location:2 → 344
      COG5347; GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport [Intracellular trafficking and secretion]
      cd08830
      Location:6 → 121
      ArfGap_ArfGap1; Arf1 GTPase-activating protein 1

    6. XM_040247699.1 → XP_040103633.1  ADP-ribosylation factor GTPase-activating protein 1 isoform X6

      Conserved Domains (2) summary
      COG5347
      Location:2 → 342
      COG5347; GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport [Intracellular trafficking and secretion]
      cd08830
      Location:6 → 121
      ArfGap_ArfGap1; Arf1 GTPase-activating protein 1

    7. XM_040247694.1 → XP_040103628.1  ADP-ribosylation factor GTPase-activating protein 1 isoform X1

      Conserved Domains (1) summary
      cd08830
      Location:6 → 121
      ArfGap_ArfGap1; Arf1 GTPase-activating protein 1

    RNA

    1. XR_005722318.1 RNA Sequence

    2. XR_005722319.1 RNA Sequence

    3. XR_005722320.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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