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    anp32a acidic (leucine-rich) nuclear phosphoprotein 32 family, member A [ Lates calcarifer (barramundi perch) ]

    Gene ID: 108887863, updated on 10-Apr-2024

    Summary

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    Gene symbol
    anp32a
    Gene description
    acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
    See related
    EnsemblRapid:ENSLCAG00010021535
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Lates calcarifer
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangaria incertae sedis; Centropomidae; Lates
    Orthologs
    human zebrafish all
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    Genomic context

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    See anp32a in Genome Data Viewer
    Location:
    chromosome: LG2
    Exon count:
    7
    Annotation release Status Assembly LG Location
    RS_2023_02 current TLL_Latcal_v3 (GCF_001640805.2) LG2 NC_066834.1 (8482485..8489266)
    100 previous assembly ASM164080v1 (GCF_001640805.1) Unplaced Scaffold NW_017364165.1 (3813227..3820017, complement)

    Linkage Group LG2 - NC_066834.1Genomic Context describing neighboring genes Neighboring gene progestin and adipoQ receptor family member Vb Neighboring gene glucuronic acid epimerase b Neighboring gene coronin, actin binding protein, 2Ba Neighboring gene integrin, alpha 11a Neighboring gene relaxin-3 receptor 1-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Immune transcriptome reveals the mincle C-type lectin receptor acts as a partial replacement for TLR4 in lipopolysaccharide-mediated inflammatory response in barramundi (Lates calcarifer). Zoccola E, et al. Mol Immunol, 2017 Mar. PMID 28095348
    2. Primary analysis of repeat elements of the Asian seabass (Lates calcarifer) transcriptome and genome. Kuznetsova IS, et al. Front Genet, 2014. PMID 25120555, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables histone binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of apoptotic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    acidic leucine-rich nuclear phosphoprotein 32 family member A
    Names
    acidic nuclear phosphoprotein 32 family member A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_001640805.2-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference TLL_Latcal_v3 Primary Assembly

    Genomic

    1. NC_066834.1 Reference TLL_Latcal_v3 Primary Assembly

      Range
      8482485..8489266
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_051075016.1 → XP_050930973.1  acidic leucine-rich nuclear phosphoprotein 32 family member A isoform X2

      Related
      ENSLCAP00010081170.1, ENSLCAT00010063400.1

    2. XM_018683500.2 → XP_018539016.1  acidic leucine-rich nuclear phosphoprotein 32 family member A isoform X1

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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