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    LOC106740436 FXYD domain-containing ion transport regulator 5 [ Alligator mississippiensis (American alligator) ]

    Gene ID: 106740436, updated on 8-May-2024

    Summary

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    Gene symbol
    LOC106740436
    Gene description
    FXYD domain-containing ion transport regulator 5
    Locus tag
    Y1Q_0020752
    See related
    EnsemblRapid:ENSAMIG00015005121
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Alligator mississippiensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
    Also known as
    FXYD5
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    Genomic context

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    See LOC106740436 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2023_09 current rAllMis1 (GCF_030867095.1) 15 NC_081838.1 (28390994..28394333)
    102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017711115.1 (315..4356, complement)

    Chromosome 15 - NC_081838.1Genomic Context describing neighboring genes Neighboring gene leucine-rich repeat LGI family member 4 Neighboring gene formin-2 Neighboring gene FXYD domain containing ion transport regulator 3 Neighboring gene IgGFc-binding protein Neighboring gene IgGFc-binding protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables sodium channel regulator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of sodium ion transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    FXYD domain-containing ion transport regulator 5; uncharacterized protein LOC106740436

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference rAllMis1 Primary Assembly

    Genomic

    1. NC_081838.1 Reference rAllMis1 Primary Assembly

      Range
      28390994..28394333
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_019492375.2 → XP_019347920.2  FXYD domain-containing ion transport regulator 5 isoform X3

    2. XM_059718755.1 → XP_059574738.1  uncharacterized protein LOC106740436 isoform X4

    3. XM_019492373.2 → XP_019347918.1  FXYD domain-containing ion transport regulator 5 isoform X1

      Related
      ENSAMIP00015006176.1, ENSAMIT00015009157.1

    4. XM_019492374.2 → XP_019347919.1  FXYD domain-containing ion transport regulator 5 isoform X2

    Nucleotide Protein
    Heading Accession and Version

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