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    LOC106074640 high mobility group protein B3-like [ Biomphalaria glabrata ]

    Gene ID: 106074640, updated on 26-Mar-2024

    Summary

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    Gene symbol
    LOC106074640
    Gene description
    high mobility group protein B3-like
    See related
    VectorBase:BGLAX_037586; EnsemblRapid:ENSHHTG00000005190
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Biomphalaria glabrata
    Lineage
    Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Gastropoda; Heterobranchia; Euthyneura; Panpulmonata; Hygrophila; Lymnaeoidea; Planorbidae; Biomphalaria
    Also known as
    HMG1
    Annotation information
    Annotation category: partial on reference assembly
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    Genomic context

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    See LOC106074640 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2023_05 current xgBioGlab47.1 (GCF_947242115.1) 4 NC_074714.1 (47103389..47105768, complement)
    100 previous assembly ASM45736v1 (GCF_000457365.1) Unplaced Scaffold NW_013435287.1 (23524..27199)

    Chromosome 4 - NC_074714.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106050901 Neighboring gene uncharacterized LOC106050900 Neighboring gene protein CFAP20DC-like Neighboring gene ninjurin-1-like Neighboring gene uncharacterized LOC129926006

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding, bending IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    high mobility group protein B3-like
    Names
    high mobility group protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001311264.1 → NP_001298193.1  high mobility group protein B3-like

      Status: PROVISIONAL

      Source sequence(s)
      AF484963
      UniProtKB/TrEMBL
      A0A2C9JZY9, Q8ITG9
      Related
      ENSHHTP00000006596.1, ENSHHTT00000009903.1
      Conserved Domains (1) summary
      cd01390
      Location:22 → 88
      HMGB-UBF_HMG-box; HMGB-UBF_HMG-box, class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone ...

    RefSeqs of Annotated Genomes: GCF_947242115.1-RS_2023_05

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference xgBioGlab47.1

    Genomic

    1. NC_074714.1 Reference xgBioGlab47.1

      Range
      47103389..47105768 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases