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    gpr143 G protein-coupled receptor 143 [ Oreochromis niloticus (Nile tilapia) ]

    Gene ID: 100709369, updated on 11-Apr-2024

    Summary

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    Gene symbol
    gpr143
    Gene description
    G protein-coupled receptor 143
    See related
    Ensembl:ENSONIG00000016023
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oreochromis niloticus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
    Expression
    Broad expression in eye (RPKM 12.9), skin (RPKM 9.0) and 9 other tissues See more
    Orthologs
    human zebrafish all
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    Genomic context

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    See gpr143 in Genome Data Viewer
    Location:
    chromosome: LG16
    Exon count:
    9
    Annotation release Status Assembly LG Location
    104 current O_niloticus_UMD_NMBU (GCF_001858045.2) LG16 NC_031987.2 (18225642..18236598)
    103 previous assembly ASM185804v2 (GCF_001858045.1) LG16 NC_031987.1 (21541367..21552306, complement)

    Linkage Group LG16 - NC_031987.2Genomic Context describing neighboring genes Neighboring gene motile sperm domain containing 2 Neighboring gene ankyrin repeat and SOCS box protein 9 Neighboring gene transducin beta like 1 X-linked Neighboring gene anosmin 1 Neighboring gene uncharacterized LOC100692654

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Oreochromis niloticus Transcriptome or Gene expression
    • Description: Oreochromis niloticus (Nile Tilapia) RNA sequencing from multiple tissues.
    • BioProject: PRJNA78915
    • Analysis date: Fri Dec 29 00:23:36 2017

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables L-DOPA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables L-DOPA receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables L-tyrosine binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables dopamine binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in melanosome organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of calcium-mediated signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in melanosome membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    G-protein coupled receptor 143

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Oreochromis niloticus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference O_niloticus_UMD_NMBU Primary Assembly

    Genomic

    1. NC_031987.2 Reference O_niloticus_UMD_NMBU Primary Assembly

      Range
      18225642..18236598
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003455437.4 → XP_003455485.1  G-protein coupled receptor 143

      UniProtKB/TrEMBL
      I3KGD8
      Related
      ENSONIP00000020183.2, ENSONIT00000020200.2
      Conserved Domains (1) summary
      pfam02101
      Location:1 → 405
      Ocular_alb; Ocular albinism type 1 protein
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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