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    TMEM106C transmembrane protein 106C [ Loxodonta africana (African savanna elephant) ]

    Gene ID: 100675345, updated on 11-Apr-2024

    Summary

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    Gene symbol
    TMEM106C
    Gene description
    transmembrane protein 106C
    See related
    EnsemblRapid:ENSLAFG00000022701
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Loxodonta africana
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
    Orthologs
    human mouse all
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    Genomic context

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    See TMEM106C in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) 4 NC_087345.1 (94637897..94643275, complement)
    102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573422.1 (33686275..33691652)

    Chromosome 4 - NC_087345.1Genomic Context describing neighboring genes Neighboring gene collagen alpha-1(II) chain-like Neighboring gene collagen type II alpha 1 chain Neighboring gene vitamin D receptor Neighboring gene histone deacetylase 7

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    transmembrane protein 106C

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mLoxAfr1.hap2

    Genomic

    1. NC_087345.1 Reference mLoxAfr1.hap2

      Range
      94637897..94643275 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003405742.3 → XP_003405790.1  transmembrane protein 106C isoform X2

      UniProtKB/TrEMBL
      G3TNB1
      Related
      ENSLAFP00000031322.1, ENSLAFT00000038540.1
      Conserved Domains (1) summary
      pfam07092
      Location:19 → 248
      DUF1356; Protein of unknown function (DUF1356)

    2. XM_023555697.2 → XP_023411465.1  transmembrane protein 106C isoform X3

      Conserved Domains (1) summary
      pfam07092
      Location:19 → 228
      DUF1356; Protein of unknown function (DUF1356)

    3. XM_010596143.2 → XP_010594445.1  transmembrane protein 106C isoform X1

      See identical proteins and their annotated locations for XP_010594445.1

      Related
      ENSLAFP00000049625.1, ENSLAFT00000049253.1
      Conserved Domains (1) summary
      pfam07092
      Location:19 → 225
      DUF1356; Protein of unknown function (DUF1356)

    4. XM_023555689.2 → XP_023411457.1  transmembrane protein 106C isoform X1

      Conserved Domains (1) summary
      pfam07092
      Location:19 → 225
      DUF1356; Protein of unknown function (DUF1356)

    5. XM_010596149.3 → XP_010594451.1  transmembrane protein 106C isoform X1

      See identical proteins and their annotated locations for XP_010594451.1

      Conserved Domains (1) summary
      pfam07092
      Location:19 → 225
      DUF1356; Protein of unknown function (DUF1356)
    Nucleotide Protein
    Heading Accession and Version

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