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    SEMA3F semaphorin 3F [ Meleagris gallopavo (turkey) ]

    Gene ID: 100550709, updated on 8-Mar-2024

    Summary

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    Gene symbol
    SEMA3F
    Gene description
    semaphorin 3F
    See related
    Ensembl:ENSMGAG00000004057
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Meleagris gallopavo
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris
    Orthologs
    human mouse all
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    Genomic context

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    See SEMA3F in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    103 current Turkey_5.1 (GCF_000146605.3) 14 NC_015024.2 (2765118..2781168)
    Build 1.1 previous assembly Turkey_2.01 (GCF_000146605.1) 14 NC_015024.1 (3179063..3194868)

    Chromosome 14 - NC_015024.2Genomic Context describing neighboring genes Neighboring gene poly(ADP-ribose) polymerase family member 3 Neighboring gene RNA binding motif protein 5 Neighboring gene vegetative cell wall protein gp1-like Neighboring gene G protein subunit alpha transducin 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chemorepellent activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables semaphorin receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in axon guidance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative chemotaxis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of axon extension involved in axon guidance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neural crest cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in semaphorin-plexin signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    semaphorin-3F

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Meleagris gallopavo Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Turkey_5.1 Primary Assembly

    Genomic

    1. NC_015024.2 Reference Turkey_5.1 Primary Assembly

      Range
      2765118..2781168
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010718375.3 → XP_010716677.1  semaphorin-3F isoform X1

      UniProtKB/TrEMBL
      A0A803XWA9
      Related
      ENSMGAP00000023805.1, ENSMGAT00000024921.1
      Conserved Domains (3) summary
      cd05871
      Location:608 → 699
      Ig_Semaphorin_classIII; Immunoglobulin (Ig)-like domain of class III semaphorin
      cd11254
      Location:48 → 547
      Sema_3F; The Sema domain, a protein interacting module, of semaphorin 3F (Sema3F)
      smart00423
      Location:546 → 572
      PSI; domain found in Plexins, Semaphorins and Integrins

    2. XM_003210018.4 → XP_003210066.1  semaphorin-3F isoform X2

      UniProtKB/TrEMBL
      G1MYJ4
      Related
      ENSMGAP00000004026.2, ENSMGAT00000004736.3
      Conserved Domains (3) summary
      cd05871
      Location:578 → 669
      Ig_Semaphorin_classIII; Immunoglobulin (Ig)-like domain of class III semaphorin
      cd11254
      Location:48 → 517
      Sema_3F; The Sema domain, a protein interacting module, of semaphorin 3F (Sema3F)
      smart00423
      Location:516 → 542
      PSI; domain found in Plexins, Semaphorins and Integrins
    Nucleotide Protein
    Heading Accession and Version

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