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    ATP11C ATPase phospholipid transporting 11C [ Sus scrofa (pig) ]

    Gene ID: 100523658, updated on 8-Mar-2024

    Summary

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    Official Symbol
    ATP11Cprovided by VGNC
    Official Full Name
    ATPase phospholipid transporting 11Cprovided by VGNC
    Primary source
    VGNC:VGNC:85635
    See related
    Ensembl:ENSSSCG00000012713
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sus scrofa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
    Expression
    Ubiquitous expression in kidney (RPKM 8.8), liver (RPKM 8.1) and 8 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See ATP11C in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    33
    Annotation release Status Assembly Chr Location
    106 current Sscrofa11.1 (GCF_000003025.6) X NC_010461.5 (114394436..114575658, complement)
    105 previous assembly Sscrofa10.2 (GCF_000003025.5) X NC_010461.4 (130614130..130659634, complement)

    Chromosome X - NC_010461.5Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110257820 Neighboring gene coagulation factor IX Neighboring gene MCF.2 cell line derived transforming sequence Neighboring gene protein transport protein SEC31-like Neighboring gene chromosome X CXorf66 homolog Neighboring gene microRNA mir-505 Neighboring gene HUWE1 associated protein modifying stress responses 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Transcriptome data used for gene annotation
    • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
    • BioProject: PRJNA311523
    • Publication: PMID 27646534
    • Analysis date: Thu Dec 14 17:10:49 2017

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATPase-coupled intramembrane lipid transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables magnesium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in phospholipid translocation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in recycling endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in trans-Golgi network IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    phospholipid-transporting ATPase IG
    Names
    ATPase, class VI, type 11C

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sscrofa11.1 Primary Assembly

    Genomic

    1. NC_010461.5 Reference Sscrofa11.1 Primary Assembly

      Range
      114394436..114575658 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021080199.1 → XP_020935858.1  phospholipid-transporting ATPase IG isoform X5

      UniProtKB/TrEMBL
      A0A8D1SJ07
      Conserved Domains (2) summary
      pfam16212
      Location:885 → 1112
      PhoLip_ATPase_C; Phospholipid-translocating P-type ATPase C-terminal
      cd02073
      Location:89 → 997
      P-type_ATPase_APLT_Dnf-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2, -10D, -11B, -11C

    2. XM_021080194.1 → XP_020935853.1  phospholipid-transporting ATPase IG isoform X1

      UniProtKB/TrEMBL
      A0A8D1SMG5
      Conserved Domains (2) summary
      pfam16212
      Location:909 → 1136
      PhoLip_ATPase_C; Phospholipid-translocating P-type ATPase C-terminal
      cd02073
      Location:89 → 1021
      P-type_ATPase_APLT_Dnf-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2, -10D, -11B, -11C

    3. XM_021080196.1 → XP_020935855.1  phospholipid-transporting ATPase IG isoform X2

      UniProtKB/TrEMBL
      A0A8D0TWE6
      Conserved Domains (2) summary
      pfam16212
      Location:909 → 1136
      PhoLip_ATPase_C; Phospholipid-translocating P-type ATPase C-terminal
      cd02073
      Location:89 → 1021
      P-type_ATPase_APLT_Dnf-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2, -10D, -11B, -11C

    4. XM_021080200.1 → XP_020935859.1  phospholipid-transporting ATPase IG isoform X6

      UniProtKB/TrEMBL
      A0A8D1GXG8, A0A8D1SMG5, F1RQ73
      Related
      ENSSSCP00000013516.3, ENSSSCT00000013899.3
      Conserved Domains (2) summary
      pfam16212
      Location:862 → 1089
      PhoLip_ATPase_C; Phospholipid-translocating P-type ATPase C-terminal
      cd02073
      Location:42 → 974
      P-type_ATPase_APLT_Dnf-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2, -10D, -11B, -11C

    5. XM_021080203.1 → XP_020935862.1  phospholipid-transporting ATPase IG isoform X9

      UniProtKB/TrEMBL
      A0A286ZST4, A0A8D1CVS0, A0A8D1SJ07
      Related
      ENSSSCP00000034531.1, ENSSSCT00000044077.1
      Conserved Domains (2) summary
      pfam16212
      Location:838 → 1065
      PhoLip_ATPase_C; Phospholipid-translocating P-type ATPase C-terminal
      cd02073
      Location:42 → 950
      P-type_ATPase_APLT_Dnf-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2, -10D, -11B, -11C

    6. XM_021080202.1 → XP_020935861.1  phospholipid-transporting ATPase IG isoform X8

      UniProtKB/TrEMBL
      A0A8D1H5W9, A0A8D1SIY8, K7GSS2
      Related
      ENSSSCP00000030961.2, ENSSSCT00000036522.4
      Conserved Domains (2) summary
      pfam16212
      Location:862 → 1089
      PhoLip_ATPase_C; Phospholipid-translocating P-type ATPase C-terminal
      cd02073
      Location:42 → 974
      P-type_ATPase_APLT_Dnf-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2, -10D, -11B, -11C

    7. XM_021080197.1 → XP_020935856.1  phospholipid-transporting ATPase IG isoform X3

      UniProtKB/TrEMBL
      A0A8D1SHX2
      Conserved Domains (2) summary
      pfam16212
      Location:909 → 1136
      PhoLip_ATPase_C; Phospholipid-translocating P-type ATPase C-terminal
      cd02073
      Location:89 → 1021
      P-type_ATPase_APLT_Dnf-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2, -10D, -11B, -11C

    8. XM_021080198.1 → XP_020935857.1  phospholipid-transporting ATPase IG isoform X4

      UniProtKB/TrEMBL
      A0A8D1SIY8
      Conserved Domains (2) summary
      pfam16212
      Location:909 → 1136
      PhoLip_ATPase_C; Phospholipid-translocating P-type ATPase C-terminal
      cd02073
      Location:89 → 1021
      P-type_ATPase_APLT_Dnf-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2, -10D, -11B, -11C

    9. XM_021080201.1 → XP_020935860.1  phospholipid-transporting ATPase IG isoform X7

      UniProtKB/TrEMBL
      A0A287AFD7, A0A8D0MQD0, A0A8D1SHX2
      Related
      ENSSSCP00000042697.1, ENSSSCT00000046314.3
      Conserved Domains (2) summary
      pfam16212
      Location:862 → 1089
      PhoLip_ATPase_C; Phospholipid-translocating P-type ATPase C-terminal
      cd02073
      Location:42 → 974
      P-type_ATPase_APLT_Dnf-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2, -10D, -11B, -11C

    RNA

    1. XR_002340696.1 RNA Sequence

    2. XR_002340697.1 RNA Sequence

    3. XR_002340698.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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