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    LOC100184368 integrin-linked protein kinase [ Ciona intestinalis (vase tunicate) ]

    Gene ID: 100184368, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC100184368
    Gene description
    integrin-linked protein kinase
    See related
    Ensembl:ENSCING00000001615
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ciona intestinalis
    Lineage
    Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia; Cionidae; Ciona
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    Genomic context

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    See LOC100184368 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    104 current KH (GCF_000224145.3) Unplaced Scaffold NW_004190785.1 (2086..4472, complement)

    NW_004190785.1Genomic Context describing neighboring genes Neighboring gene integrin-linked protein kinase pseudogene

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_004190785 Unplaced Scaffold Reference KH Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A cDNA resource from the basal chordate Ciona intestinalis. Satou Y, et al. Genesis, 2002 Aug. PMID 12203911

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell-matrix adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in integrin-mediated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in substrate adhesion-dependent cell spreading IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in focal adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in stress fiber IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    integrin-linked protein kinase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Ciona intestinalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference KH Primary Assembly

    Genomic

    1. NW_004190785.1 Reference KH Primary Assembly

      Range
      2086..4472 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002119902.5 → XP_002119938.1  integrin-linked protein kinase

      UniProtKB/TrEMBL
      A0A1W2W6A3, F6RZA6
      Related
      ENSCINP00000003234
      Conserved Domains (6) summary
      cd00204
      Location:28 → 135
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      cd14057
      Location:196 → 445
      PK_ILK; Pseudokinase domain of Integrin Linked Kinase
      pfam07714
      Location:192 → 442
      Pkinase_Tyr; Protein tyrosine kinase
      pfam12796
      Location:38 → 130
      Ank_2; Ankyrin repeats (3 copies)
      pfam13637
      Location:4 → 54
      Ank_4; Ankyrin repeats (many copies)
      sd00045
      Location:35 → 64
      ANK; ANK repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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