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    IT oxytocin/vasopressin-like peptide [ Tribolium castaneum (red flour beetle) ]

    Gene ID: 100038343, updated on 12-Apr-2024

    Summary

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    Gene symbol
    IT
    Gene description
    oxytocin/vasopressin-like peptide
    Locus tag
    TcasGA2_TC006626
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Tribolium castaneum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
    Also known as
    Avpl
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    Genomic context

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    Location:
    chromosome: LG8
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_04 current icTriCast1.1 (GCF_031307605.1) 6 NC_087399.1 (2694111..2694764)
    103 previous assembly Tcas5.2 (GCF_000002335.3) Linkage Group LG8 NC_007423.3 (12079157..12079812, complement)

    Chromosome 6 - NC_087399.1Genomic Context describing neighboring genes Neighboring gene Septin 4 Neighboring gene esterase B1 Neighboring gene carboxypeptidase M Neighboring gene ras-related protein Rab-28-like Neighboring gene Major Facilitator Superfamily Transporter 10 Neighboring gene SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 homolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Vasopressin-like peptide and its receptor function in an indirect diuretic signaling pathway in the red flour beetle. Aikins MJ, et al. Insect Biochem Mol Biol, 2008 Jul. PMID 18549960
    2. Cloning and identification of an oxytocin/vasopressin-like receptor and its ligand from insects. Stafflinger E, et al. Proc Natl Acad Sci U S A, 2008 Mar 4. PMID 18316733, Free PMC Article
    3. BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum. Kim HS, et al. Nucleic Acids Res, 2010 Jan. PMID 19820115, Free PMC Article
    4. The genome of the model beetle and pest Tribolium castaneum. Tribolium Genome Sequencing Consortium, et al. Nature, 2008 Apr 24. PMID 18362917

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. AVPL/AVPL receptor signaling pathway may have been near-dispensable in the early lineage of holometabolous insects.
      Title: Vasopressin-like peptide and its receptor function in an indirect diuretic signaling pathway in the red flour beetle.
    Submit: New GeneRIF Correction

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables neurohypophyseal hormone activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in secretory granule IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    oxytocin/vasopressin-like peptide
    Names
    AUGUSTUS-3.0.2_06626
    GLEAN_06626
    arginine vasopressin-like peptide
    inotocin
    vasopressin-like preprohormone

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001085362.1 → NP_001078831.1  oxytocin/vasopressin-like peptide precursor

      See identical proteins and their annotated locations for NP_001078831.1

      Status: PROVISIONAL

      Source sequence(s)
      EF222295
      UniProtKB/TrEMBL
      A3RE83
      Conserved Domains (1) summary
      pfam00184
      Location:43 → 122
      Hormone_5; Neurohypophysial hormones, C-terminal Domain

    RefSeqs of Annotated Genomes: GCF_031307605.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference icTriCast1.1 Primary Assembly

    Genomic

    1. NC_087399.1 Reference icTriCast1.1 Primary Assembly

      Range
      2694111..2694764
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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