The crystal structure of mouse phosphoglucose isomerase at 1.6A resolution and its complex with glucose 6-phosphate reveals the catalytic mechanism of sugar ring opening

J Mol Biol. 2004 Sep 17;342(3):847-60. doi: 10.1016/j.jmb.2004.07.085.

Abstract

Phosphoglucose isomerase (PGI) is an enzyme of glycolysis that interconverts glucose 6-phosphate (G6P) and fructose 6-phosphate (F6P) but, outside the cell, is a multifunctional cytokine. High-resolution crystal structures of the enzyme from mouse have been determined in native form and in complex with the inhibitor erythrose 4-phosphate, and with the substrate glucose 6-phosphate. In the substrate-bound structure, the glucose sugar is observed in both straight-chain and ring forms. This structure supports a specific role for Lys518 in enzyme-catalyzed ring opening and we present a "push-pull" mechanism in which His388 breaks the O5-C1 bond by donating a proton to the ring oxygen atom and, simultaneously, Lys518 abstracts a proton from the C1 hydroxyl group. The reverse occurs in ring closure. The transition from ring form to straight-chain substrate is achieved through rotation of the C3-C4 bond, which brings the C1-C2 region into close proximity to Glu357, the base catalyst for the isomerization step. The structure with G6P also explains the specificity of PGI for glucose 6-phosphate over mannose 6-isomerase (M6P). To isomerize M6P to F6P requires a rotation of its C2-C3 bond but in PGI this is sterically blocked by Gln511.

Publication types

  • Comparative Study
  • Research Support, U.S. Gov't, Non-P.H.S.
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Animals
  • Catalytic Domain
  • Crystallography, X-Ray
  • Enzyme Inhibitors / chemistry
  • Enzyme Inhibitors / pharmacology
  • Fructosephosphates / chemistry
  • Fructosephosphates / metabolism
  • Glucose-6-Phosphate / chemistry
  • Glucose-6-Phosphate / metabolism
  • Glucose-6-Phosphate Isomerase / antagonists & inhibitors
  • Glucose-6-Phosphate Isomerase / chemistry*
  • Glucose-6-Phosphate Isomerase / genetics
  • Glucose-6-Phosphate Isomerase / metabolism
  • In Vitro Techniques
  • Macromolecular Substances
  • Mice
  • Models, Molecular
  • Protein Conformation
  • Rabbits
  • Recombinant Proteins / antagonists & inhibitors
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / genetics
  • Recombinant Proteins / metabolism
  • Species Specificity
  • Substrate Specificity
  • Sugar Phosphates / chemistry
  • Sugar Phosphates / pharmacology

Substances

  • Enzyme Inhibitors
  • Fructosephosphates
  • Macromolecular Substances
  • Recombinant Proteins
  • Sugar Phosphates
  • Glucose-6-Phosphate
  • erythrose 4-phosphate
  • fructose-6-phosphate
  • Glucose-6-Phosphate Isomerase

Associated data

  • PDB/1U0E
  • PDB/1U0F
  • PDB/1U0G
  • PDB/E4P
  • PDB/F6P