Gene structure and promoter for Adh3 encoding mouse class IV alcohol dehydrogenase (retinol dehydrogenase)

Genomics. 1997 Apr 1;41(1):105-9. doi: 10.1006/geno.1997.4637.

Abstract

Class IV alcohol dehydrogenase (ADH) has been shown to function in vitro as a retinol dehydrogenase catalyzing the synthesis of retinoic acid, a pleiotropic gene regulator. To enable genetic studies on the function of this enzyme and regulation of its gene, we have screened a genomic library and isolated the mouse class IV ADH gene (Adh3). The complete mouse class IV ADH coding region was found in nine exons spanning a 14-kb region. Primer extension analysis was used to map the transcription initiation site to a position lying 30 bp upstream of the ATG translation start codon. Nucleotide sequence analysis of the promoter region indicated an absence of both TATA-box and GC-box sequences; this distinguishes it from the promoters for class I, II, and III ADH genes. Sequence comparison of the mouse and human class IV ADH promoters indicated that they share a conserved region located 125-145 bp upstream of the coding region containing adjacent sequences matching the consensus binding sites for transcription factors AP-1 and C/EBP.

Publication types

  • Comparative Study
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Alcohol Oxidoreductases / genetics*
  • Amino Acid Sequence
  • Animals
  • Base Sequence
  • Binding Sites / genetics
  • Consensus Sequence
  • Conserved Sequence
  • DNA / genetics
  • DNA / metabolism
  • DNA Primers / genetics
  • Exons
  • Humans
  • Mice
  • Molecular Sequence Data
  • Promoter Regions, Genetic*
  • Restriction Mapping
  • Species Specificity
  • Transcription Factors / metabolism

Substances

  • DNA Primers
  • Transcription Factors
  • DNA
  • Alcohol Oxidoreductases
  • retinol dehydrogenase

Associated data

  • GENBANK/U76727
  • GENBANK/U76728
  • GENBANK/U76729
  • GENBANK/U76730
  • GENBANK/U76731
  • GENBANK/U76732
  • GENBANK/U76733
  • GENBANK/U76734