Molecular dynamics of MHC genesis unraveled by sequence analysis of the 1,796,938-bp HLA class I region

Proc Natl Acad Sci U S A. 1999 Nov 9;96(23):13282-7. doi: 10.1073/pnas.96.23.13282.

Abstract

The intensely studied MHC has become the paradigm for understanding the architectural evolution of vertebrate multigene families. The 4-Mb human MHC (also known as the HLA complex) encodes genes critically involved in the immune response, graft rejection, and disease susceptibility. Here we report the continuous 1,796,938-bp genomic sequence of the HLA class I region, linking genes between MICB and HLA-F. A total of 127 genes or potentially coding sequences were recognized within the analyzed sequence, establishing a high gene density of one per every 14.1 kb. The identification of 758 microsatellite provides tools for high-resolution mapping of HLA class I-associated disease genes. Most importantly, we establish that the repeated duplication and subsequent diversification of a minimal building block, MIC-HCGIX-3.8-1-P5-HCGIV-HLA class I-HCGII, engendered the present-day MHC. That the currently nonessential HLA-F and MICE genes have acted as progenitors to today's immune-competent HLA-ABC and MICA/B genes provides experimental evidence for evolution by "birth and death," which has general relevance to our understanding of the evolutionary forces driving vertebrate multigene families.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Base Pairing
  • Biological Evolution
  • Genes, MHC Class I*
  • Humans
  • Microsatellite Repeats
  • Molecular Sequence Data
  • Repetitive Sequences, Nucleic Acid

Associated data

  • GENBANK/AB014077
  • GENBANK/AB014078
  • GENBANK/AB014079
  • GENBANK/AB014080
  • GENBANK/AB014081
  • GENBANK/AB014082
  • GENBANK/AB014083
  • GENBANK/AB014084
  • GENBANK/AB014085
  • GENBANK/AB014086
  • GENBANK/AB014087
  • GENBANK/AB014088
  • GENBANK/AB023048
  • GENBANK/AB023049
  • GENBANK/AB023050
  • GENBANK/AB023051
  • GENBANK/AB023052
  • GENBANK/AB023053
  • GENBANK/AB023054
  • GENBANK/AB023055
  • GENBANK/AB023056
  • GENBANK/AB023057
  • GENBANK/AB023058
  • GENBANK/AB023059
  • GENBANK/AB023060