Embryonic stem cell ERK, AKT, plus STAT3 response dynamics combinatorics are heterogeneous but NANOG state independent

Stem Cell Reports. 2023 Jun 13;18(6):1295-1307. doi: 10.1016/j.stemcr.2023.04.008. Epub 2023 May 18.

Abstract

Signaling is central in cell fate regulation, and relevant information is encoded in its activity over time (i.e., dynamics). However, simultaneous dynamics quantification of several pathways in single mammalian stem cells has not yet been accomplished. Here we generate mouse embryonic stem cell (ESC) lines simultaneously expressing fluorescent reporters for ERK, AKT, and STAT3 signaling activity, which all control pluripotency. We quantify their single-cell dynamics combinations in response to different self-renewal stimuli and find striking heterogeneity for all pathways, some dependent on cell cycle but not pluripotency states, even in ESC populations currently assumed to be highly homogeneous. Pathways are mostly independently regulated, but some context-dependent correlations exist. These quantifications reveal surprising single-cell heterogeneity in the important cell fate control layer of signaling dynamics combinations and raise fundamental questions about the role of signaling in (stem) cell fate control.

Keywords: AKT; ERK; ESC; STAT3; dynamics; heterogeneity; signaling; time-lapse.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Cell Differentiation
  • Embryonic Stem Cells* / metabolism
  • Mammals / metabolism
  • Mice
  • Mouse Embryonic Stem Cells / metabolism
  • Nanog Homeobox Protein / genetics
  • Nanog Homeobox Protein / metabolism
  • Proto-Oncogene Proteins c-akt* / metabolism
  • Signal Transduction

Substances

  • Nanog Homeobox Protein
  • Proto-Oncogene Proteins c-akt
  • Stat3 protein, mouse
  • Nanog protein, mouse