The Deubiquitinating Enzyme USP48 Interacts with the Retinal Degeneration-Associated Proteins UNC119a and ARL3

Int J Mol Sci. 2022 Oct 19;23(20):12527. doi: 10.3390/ijms232012527.

Abstract

Proteins related to the ubiquitin-proteasome system play an important role during the differentiation and ciliogenesis of photoreceptor cells. Mutations in several genes involved in ubiquitination and proteostasis have been identified as causative of inherited retinal dystrophies (IRDs) and ciliopathies. USP48 is a deubiquitinating enzyme whose role in the retina is still unexplored although previous studies indicate its relevance for neurosensory organs. In this work, we describe that a pool of endogenous USP48 localises to the basal body in retinal cells and provide data that supports the function of USP48 in the photoreceptor cilium. We also demonstrate that USP48 interacts with the IRD-associated proteins ARL3 and UNC119a, and stabilise their protein levels using different mechanisms. Our results suggest that USP48 may act in the regulation/stabilisation of key ciliary proteins for photoreceptor function, in the modulation of intracellular protein transport, and in ciliary trafficking to the photoreceptor outer segment.

Keywords: USP48; ciliopathies; cilium; inherited retinal dystrophies; retina.

MeSH terms

  • ADP-Ribosylation Factors / genetics
  • ADP-Ribosylation Factors / metabolism
  • Cilia / metabolism
  • Deubiquitinating Enzymes / metabolism
  • Humans
  • Photoreceptor Cells / metabolism
  • Proteasome Endopeptidase Complex* / metabolism
  • Retinal Dystrophies*
  • Ubiquitin / metabolism
  • Ubiquitin-Specific Proteases / metabolism

Substances

  • Proteasome Endopeptidase Complex
  • Ubiquitin
  • Deubiquitinating Enzymes
  • ARL3 protein, human
  • ADP-Ribosylation Factors
  • USP48 protein, human
  • Ubiquitin-Specific Proteases