Cancer-derived UTX TPR mutations G137V and D336G impair interaction with MLL3/4 complexes and affect UTX subcellular localization

Oncogene. 2020 Apr;39(16):3322-3335. doi: 10.1038/s41388-020-1218-3. Epub 2020 Feb 18.

Abstract

The ubiquitously transcribed tetratricopeptide repeat on X chromosome (UTX) is a major histone H3 lysine 27 (H3K27) demethylase and the mixed-lineage leukemia (MLL) proteins are the H3K4 methyltransferases. UTX is one of the major components of MLL3- and MLL4-containing (MlLL3/4) complexes and likely has functions within the complexes. Although UTX is frequently mutated in various types of cancer and is thought to play a crucial role as a tumor suppressor, the importance of UTX interaction with MLL3/4 complexes in cancer formation is poorly understood. Here, we analyzed the ability of cancer-derived UTX mutant proteins to interact with ASH2L, which is a common core component of all the MLL complexes, and MLL3/4-specific components PTIP and PA1, and found that several single-amino acid substitution mutations in the tetratricopeptide repeat (TPR) affect UTX interaction with these components. Interaction-compromised mutants G137V and D336G and a TPR-deleted mutant Δ80-397 were preferentially localized to the cytoplasm, suggesting that UTX is retained in the nucleus by MLL3/4 complexes through their interaction with the TPR. Intriguingly, WT UTX suppressed colony formation in soft agar, whereas G137V failed. This suggests that interaction of UTX with MLL3/4 complex plays a crucial role in their tumor suppressor function. Preferential cytoplasmic localization was also observed for endogenous proteins of G137V and another mutant G137VΔ138 in HCT116 created by CRISPR-Cas9 gene editing. Interestingly, expression levels of these mutants were low and MG312 stabilized both endogenous as well as exogenous G137V proteins. These results reveal a novel mechanism of UTX regulation and reinforce the importance of UTX interaction with MLL3/4 complexes in cancer formation.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Substitution / genetics
  • CRISPR-Cas Systems / genetics
  • Cell Cycle Proteins / genetics
  • Colorectal Neoplasms / genetics*
  • Colorectal Neoplasms / pathology
  • DNA-Binding Proteins / genetics*
  • Gene Expression Regulation, Neoplastic / genetics
  • HCT116 Cells
  • Histone Demethylases / genetics*
  • Histone-Lysine N-Methyltransferase / genetics
  • Humans
  • Jumonji Domain-Containing Histone Demethylases / genetics
  • Mutation / genetics
  • Nuclear Proteins / genetics*
  • Tetratricopeptide Repeat / genetics*
  • Transcription Factors / genetics*

Substances

  • ASH2L protein, human
  • Cell Cycle Proteins
  • DNA-Binding Proteins
  • KMT2C protein, human
  • Nuclear Proteins
  • PAGR1 protein, human
  • PAXIP1 protein, human
  • Transcription Factors
  • Histone Demethylases
  • Jumonji Domain-Containing Histone Demethylases
  • KDM6A protein, human
  • KDM6B protein, human
  • Histone-Lysine N-Methyltransferase
  • MLL4 protein, human