The Role of Eif6 in Skeletal Muscle Homeostasis Revealed by Endurance Training Co-expression Networks

Cell Rep. 2017 Nov 7;21(6):1507-1520. doi: 10.1016/j.celrep.2017.10.040.

Abstract

Regular endurance training improves muscle oxidative capacity and reduces the risk of age-related disorders. Understanding the molecular networks underlying this phenomenon is crucial. Here, by exploiting the power of computational modeling, we show that endurance training induces profound changes in gene regulatory networks linking signaling and selective control of translation to energy metabolism and tissue remodeling. We discovered that knockdown of the mTOR-independent factor Eif6, which we predicted to be a key regulator of this process, affects mitochondrial respiration efficiency, ROS production, and exercise performance. Our work demonstrates the validity of a data-driven approach to understanding muscle homeostasis.

Keywords: Eif6; exercise; metabolism; mitochondria; network biology; skeletal muscle; systems biology.

MeSH terms

  • Acetylation
  • Animals
  • Calorimetry
  • Chromatography, High Pressure Liquid
  • Down-Regulation
  • Energy Metabolism / physiology
  • Eukaryotic Initiation Factors / deficiency
  • Eukaryotic Initiation Factors / genetics
  • Eukaryotic Initiation Factors / metabolism*
  • Exercise*
  • Gene Regulatory Networks
  • Humans
  • Mice
  • Mice, Inbred C57BL
  • Mice, Knockout
  • Mitochondria / metabolism
  • Muscle, Skeletal / metabolism*
  • Oligonucleotide Array Sequence Analysis
  • Oxygen / metabolism
  • Physical Conditioning, Animal
  • Proteome / analysis
  • Reactive Oxygen Species / metabolism
  • Ribosomes / metabolism
  • Tandem Mass Spectrometry
  • Transcription, Genetic
  • Up-Regulation

Substances

  • Eukaryotic Initiation Factors
  • Proteome
  • Reactive Oxygen Species
  • Oxygen