A potential role for protein palmitoylation and zDHHC16 in DNA damage response

BMC Mol Biol. 2016 May 10;17(1):12. doi: 10.1186/s12867-016-0065-9.

Abstract

Background: Cells respond to DNA damage by activating the phosphatidylinositol-3 kinase-related kinases, p53 and other pathways to promote cell cycle arrest, apoptosis, and/or DNA repair. Here we report that protein palmitoylation, a modification carried out by protein acyltransferases with zinc-finger and Asp-His-His-Cys domains (zDHHC), is required for proper DNA damage responses.

Results: Inhibition of protein palmitoylation compromised DNA damage-induced activation of Atm, induction and activation of p53, cell cycle arrest at G2/M phase, and DNA damage foci assembly/disassembly in primary mouse embryonic fibroblasts. Furthermore, knockout of zDHHC16, a palmitoyltransferase gene identified as an interacting protein for c-Abl, a non-receptor tyrosine kinase involved in DNA damage response, reproduced most of the defects in DNA damage responses produced by the inhibition of protein palmitoylation.

Conclusions: Our results revealed critical roles for protein palmitoylation and palmitoyltransferase zDHHC16 in early stages of DNA damage responses and in the regulation of Atm activation.

Keywords: DNA damage response; Protein palmitoylation; zDHHC16.

MeSH terms

  • Acyltransferases
  • Animals
  • Apoptosis
  • Ataxia Telangiectasia Mutated Proteins / metabolism
  • Carrier Proteins / genetics
  • Carrier Proteins / metabolism*
  • Cell Cycle Checkpoints
  • Cells, Cultured
  • DNA Damage*
  • DNA Repair*
  • Female
  • Fibroblasts / cytology
  • Fibroblasts / metabolism
  • Gene Deletion
  • Gene Knockout Techniques
  • Lipoylation
  • Mice, Inbred C57BL
  • Protein Interaction Maps
  • Proto-Oncogene Proteins c-abl / metabolism
  • Tumor Suppressor Protein p53 / metabolism

Substances

  • Carrier Proteins
  • Tumor Suppressor Protein p53
  • Acyltransferases
  • Zdhhc16 protein, mouse
  • Proto-Oncogene Proteins c-abl
  • Ataxia Telangiectasia Mutated Proteins
  • Atm protein, mouse