Complete mitochondrial genome of the Japanese wood pigeon, Columba janthina janthina (Columbiformes, Columbidae)

Mitochondrial DNA A DNA Mapp Seq Anal. 2016 May;27(3):2165-6. doi: 10.3109/19401736.2014.982608. Epub 2014 Nov 28.

Abstract

The complete mitochondrial genome of Columba janthina janthina was sequenced and its total length was 17,469 bp, containing 13 protein-coding genes, 2 ribosomal RNAs, 22 transfer RNAs and 1 non-coding control region (D-loop). The A+T content of the overall base composition of H-strand were 54.46% (30.38% A, 24.08% T, 32.00% C and 13.54% G). The arrangement of all genes was identical to the typical mitochondrial genomes of pigeon. Within the control region, conserved sequences were identified in three domains. These results provide basic information for phylogenetic analyses of pigeon, especially Columbiformes species.

Keywords: Columba janthina janthina; complete mitochondrial genome; non-coding control region.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Base Composition / genetics
  • Base Sequence / genetics
  • Columbidae / genetics*
  • Columbiformes / genetics
  • DNA, Mitochondrial / genetics
  • Gene Order
  • Genes, Mitochondrial / genetics
  • Genome / genetics
  • Genome, Mitochondrial / genetics*
  • Phylogeny
  • Sequence Analysis, DNA / methods
  • Whole Genome Sequencing / methods

Substances

  • DNA, Mitochondrial