A gemcitabine sensitivity screen identifies a role for NEK9 in the replication stress response

Nucleic Acids Res. 2014 Oct;42(18):11517-27. doi: 10.1093/nar/gku840. Epub 2014 Sep 12.

Abstract

The Replication Stress Response (RSR) is a signaling network that recognizes challenges to DNA replication and coordinates diverse DNA repair and cell-cycle checkpoint pathways. Gemcitabine is a nucleoside analogue that causes cytotoxicity by inducing DNA replication blocks. Using a synthetic lethal screen of a RNAi library of nuclear enzymes to identify genes that when silenced cause gemcitabine sensitization or resistance in human triple-negative breast cancer cells, we identified NIMA (never in mitosis gene A)-related kinase 9 (NEK9) as a key component of the RSR. NEK9 depletion in cells leads to replication stress hypersensitivity, spontaneous accumulation of DNA damage and RPA70 foci, and an impairment in recovery from replication arrest. NEK9 protein levels also increase in response to replication stress. NEK9 complexes with CHK1, and moreover, NEK9 depletion impairs CHK1 autophosphorylation and kinase activity in response to replication stress. Thus, NEK9 is a critical component of the RSR that promotes CHK1 activity, maintaining genome integrity following challenges to DNA replication.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Antimetabolites, Antineoplastic / pharmacology*
  • Cell Line, Tumor
  • Checkpoint Kinase 1
  • DNA Damage
  • DNA Replication*
  • Deoxycytidine / analogs & derivatives*
  • Deoxycytidine / pharmacology
  • Female
  • Gemcitabine
  • Humans
  • NIMA-Related Kinases
  • Protein Kinases / metabolism
  • Protein Serine-Threonine Kinases / genetics
  • Protein Serine-Threonine Kinases / metabolism
  • Protein Serine-Threonine Kinases / physiology*
  • Replication Protein A / analysis
  • Stress, Physiological / genetics*
  • Triple Negative Breast Neoplasms / genetics

Substances

  • Antimetabolites, Antineoplastic
  • RPA1 protein, human
  • Replication Protein A
  • Deoxycytidine
  • Protein Kinases
  • CHEK1 protein, human
  • Checkpoint Kinase 1
  • NEK9 protein, human
  • NIMA-Related Kinases
  • Protein Serine-Threonine Kinases
  • Gemcitabine