Identification of splicing variants of Frabin with partly different functions and tissue distribution

Biochem Biophys Res Commun. 2001 Sep 7;286(5):1066-72. doi: 10.1006/bbrc.2001.5481.

Abstract

Frabin is a GDP/GTP exchange protein for Cdc42 small G protein with actin filament-binding activity. Frabin consists of the actin filament-binding domain, the Dbl homology domain, the first pleckstrin homology domain, the FYVE-finger domain, and the second pleckstrin homology domain in this order from the N-terminus. Frabin forms filopodia through direct activation of Cdc42 and lamellipodia through indirect activation of Rac small G protein. We isolated here two smaller splicing variants of frabin and named the original one, middle-size one, and smallest one frabin-alpha, -beta, and -gamma, respectively. Frabin-beta lacked the second pleckstrin homology domain and frabin-gamma lacked the FYVE-finger domain and the second pleckstrin homology domain. These three variants were expressed in all of the tissues examined but their expression levels are different depending on tissues. In L fibroblasts, all the three variants formed filopodia. As to lamellipodia, frabin-alpha formed them; frabin-beta formed them to a small extent; and frabin-gamma did not. In MDCK epithelial cells, frabin-alpha formed microspikes but frabin-beta or -gamma did not.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alternative Splicing*
  • Amino Acid Sequence
  • Animals
  • Blotting, Western
  • COS Cells
  • Cell Line
  • Cloning, Molecular
  • DNA, Complementary / metabolism
  • Dogs
  • Enzyme Activation
  • Epithelial Cells / metabolism
  • Fibroblasts / metabolism
  • Mice
  • Microfilament Proteins / chemistry*
  • Models, Genetic
  • Molecular Sequence Data
  • Protein Structure, Tertiary
  • Reverse Transcriptase Polymerase Chain Reaction
  • Sequence Homology, Amino Acid
  • Tissue Distribution
  • Transfection
  • cdc42 GTP-Binding Protein / chemistry

Substances

  • DNA, Complementary
  • FGD4 protein, human
  • Fgd4 protein, mouse
  • Microfilament Proteins
  • cdc42 GTP-Binding Protein