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Submitted SNP(ss) Details: ss2812880408           
Submitter
HandleGNOMAD
Submitter SNP IDrs1800591
RefSNP(rs#)rs1800591
Submitted Batch IDgenome_batch_chr4
Submitted DateMay 18, 2017
Publication CitedN.D.
First entry to dbSNPMay 18 2017 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGNOMAD
Ascertainment Samplesize30992
PopulationN.D.
Allele
Observed AlleleG/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 9
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2812880408|allelePos=26|len=51|taxid=9606|alleles='G/T'|mol=Genomic
 TTAACATTAT TTTGAAGTGA TTGGT
 K
 GTGGTATGAA TTAACAGTTT AAATT

  Submitted Frequency for ss2812880408 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
FIN3492G=0.82617414
T=0.17382589
gnomad-FINGNOMAD
NFE14954G=0.74341315
T=0.25658688
gnomad-NFEGNOMAD
EAS1618G=0.86341161
T=0.13658838
gnomad-EASGNOMAD
FEMALE13822G=0.75365359
T=0.24634640
gnomad-FEMALEGNOMAD
AMR838G=0.81384248
T=0.18615752
gnomad-AMRGNOMAD
AFR8718G=0.72505164
T=0.27494839
gnomad-AFRGNOMAD
MALE17078G=0.75447947
T=0.24552055
gnomad-MALEGNOMAD
OTH978G=0.74437630
T=0.25562373
gnomad-OTHGNOMAD
ASJ302G=0.56953645
T=0.43046358
gnomad-ASJGNOMAD


  dbSNP summary of Genotypes for ss2812880408 back to top
No sufficient data to compute Hardy-weinberg probability for ss2812880408.


  Submitted individual genotype for ss2812880408 back to top
There is no individual genotype data for ss2812880408.

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