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Submitted SNP(ss) Details: ss2089183           
Submitter
HandleTSC-CSHL
Submitter SNP IDTSC0800013
RefSNP(rs#)rs1320754
Submitted Batch ID001018_25
Submitted DateOct 19, 2000
Publication CitedN.D.
First entry to dbSNPOct 19 2000 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodTSC-SANGER-19-26
Ascertainment Samplesize10
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral Allele
Allele OriginN/A
SNP ClassSNV
CpG CodenonCpG
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2089183|allelePos=295|len=589|taxid=9606|alleles='A/G'|mol=Genomic
 TTAGAATAAT CACTTCAACA ATTATAGTAA TTGTTTGACT CTTGCTAAGT AAGTATCTTG
 GAACATATTT CAACTTTTAA TGCACATTTT ATTCACTATA TATATAAAGA ATATATATAA
 TTCCTTCTTA ACATACaata aaatttatta aatattaaGG ATTATTAAGA GGATATAATT
 GAAATATTAG AAAGCTATTT AACATTTTTT ACTTTTTAAA GTATTTATTC ATATTAAATC
 ATTTCAAGTA TTTCTACACA TTACAAACAC TGTGAGATAA TCATATTTCA AATT
 R
 AAAACAAAAA TCCTTCTCCA CAAATCACCT TTACCAACTG TCTTCACCAA TGTTTACCCT
 TTCAAAATAT TTTTATCTCA TATACAAGAG ATAAAGTGAT AATAATATAA TTAGGGGTGA
 GTAGAGTAAG TAACCAGTTC CTCTGAGTAT GTGCTCCAAT TACTTTAGGT AATGTGATGA
 AACAGTGATT GGTGAGAATA TTGAAAACTA TATGAGGAGA AGCAGAGAAA AATAAGTTAA
 TCAGCCACTT AGGTAAAAAT GATCAGTTCC ATTTGAGACT GTCCTCTACC AGTC

  Submitted Frequency for ss2089183 back to top
There is no frequency submission for ss2089183.


  dbSNP summary of Genotypes for ss2089183 back to top

Population ID
 -Class		Total
Sample
(2N)		Founder
(2N)		Major
Allele
Freq.		Minor
Allele
Freq.		Genotype
Freq.		HWE Goodness of FitData
Source
HapMap-CEU120120A=0.54166669
G=0.45833334A/G=0.48333332
A/A=0.30000001
G/G=0.21666667
Pr(chiSq=0.042,df=1)
=1.000		Genotype
Freq.

  Submitted individual genotype for ss2089183 back to top
There is no individual genotype data for ss2089183.

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