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Submitted SNP(ss) Details: ss2089175           
Submitter
HandleTSC-CSHL
Submitter SNP IDTSC0800003
RefSNP(rs#)rs1320746
Submitted Batch ID001018_25
Submitted DateOct 19, 2000
Publication CitedN.D.
First entry to dbSNPOct 19 2000 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodTSC-SANGER-19-26
Ascertainment Samplesize10
PopulationN.D.
Allele
Observed AlleleA/T
Ancestral Allele
Allele OriginN/A
SNP ClassSNV
CpG CodenonCpG
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency Submissionpopulation count: 1
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2089175|allelePos=392|len=553|taxid=9606|alleles='A/T'|mol=Genomic
 TTCGTAGTAA CAGTCATTTA TCATGCAGAG AAATAGCACT GGTGTTGTGT CTAACACAAA
 ATATGGAGCA GTTGCCTCAA CAGATCTCTA AGTTGTCAAA TATGACATTC CATGTGGAGA
 AAAGCTATAT TCCAACAGAA AGCACAGGCC AAAAAAAGAA AAAAAAAAGC TTAAGATGTA
 GAATTAAATT AGATACAACA GAGGAAATCT TTAGCCTGGC AATGCAACTA CACACTTTAT
 TACTTTTGTC AGTAAGTATA CACAGGCACA CAATAGCTTT TTACTTTTTT CCTTTTAGCA
 TATACCTTAT TTGAAACCTT TGAGGCTGAT TGTTTAATGA AATATAATAC TGCAGCTTAT
 AATTTTAAAT TGCTGTTGAA CTTGGTATTT T
 W
 ATTAAATATT GTCTGTCTCA TTCCCAAACC TCAGCAAATG CATACAAATT GGCAACTATT
 AATACTCCAT TGGATCTGAT TTTTAGAATA TAATAAATAT TTACTTTTGT ATAGTTTACT
 AATATAAAAT ACTAGCTGAT TAAGCAAGTT TATTTGAGGA T

  Submitted Frequency for ss2089175 back to top

Population ID
 -Class		Sample
(2n)		Major
Allele
Freq.		Minor
Allele
Freq.		Estimated
Heterozygosity
+/-std.err.		Genotype
Freq.		Submitted
Hetero-
zygosity		Submission
Batch		Submitter
CEPH
- MULTI-NATIONAL 		184A=0.76999998
T=0.23000000
0.354 +/-0.0471_2004SEQUENOM


  dbSNP summary of Genotypes for ss2089175 back to top
No sufficient data to compute Hardy-weinberg probability for ss2089175.


  Submitted individual genotype for ss2089175 back to top
There is no individual genotype data for ss2089175.

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