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Select item 37699711.

SIRT5-Mediated Lysine Desuccinylation Impacts Diverse Metabolic Pathways

Jeongsoon Park, Yue Chen, Daniel X. Tishkoff, Chao Peng, Minjia Tan, Lunzhai Dai, Zhongyu Xie, Yi Zhang, Bernadette M.M. Zwaans, Mary E. Skinner, David B. Lombard, Yingming Zhao

Mol Cell. Author manuscript; available in PMC 2014 Jun 27.

Published in final edited form as: Mol Cell. 2013 Jun 27; 50(6): 919–930. doi: 10.1016/j.molcel.2013.06.001

PMCID:: PMC3769971

Abstract Article PDF–2.4M

Select item 36846282.

The mTORC1 pathway stimulates glutamine metabolism and cell proliferation by repressing SIRT4

Alfred Csibi, Sarah-Maria Fendt, Chenggang Li, George Poulogiannis, Andrew Y. Choo, Douglas J. Chapski, Seung Min Jeong, Jamie Dempsey, Andrey Parkhitko, Tasha Morrison, Elizabeth Henske, Marcia Haigis, Lewis C. Cantley, Gregory Stephanopoulos, Jane Yu, John Blenis

Cell. Author manuscript; available in PMC 2014 May 9.

Published in final edited form as: Cell. 2013 May 9; 153(4): 840–854. doi: 10.1016/j.cell.2013.04.023

PMCID:: PMC3684628

Abstract Article PDF–2.2M

Select item 36316883.

Label-free quantitative proteomics of the lysine acetylome in mitochondria identifies substrates of SIRT3 in metabolic pathways

Matthew J. Rardin, John C. Newman, Jason M. Held, Michael P. Cusack, Dylan J. Sorensen, Biao Li, Birgit Schilling, Sean D. Mooney, C. Ronald Kahn, Eric Verdin, Bradford W. Gibson

Proc Natl Acad Sci U S A. 2013 Apr 16; 110(16): 6601–6606. Published online 2013 Apr 1. doi: 10.1073/pnas.1302961110

PMCID:: PMC3631688

Abstract Article PDF–851K

Select item 30359694.

A Tissue-Specific Atlas of Mouse Protein Phosphorylation and Expression

Edward L. Huttlin, Mark P. Jedrychowski, Joshua E. Elias, Tapasree Goswami, Ramin Rad, Sean A. Beausoleil, Judit Villén, Wilhelm Haas, Mathew E. Sowa, Steven P. Gygi

Cell. Author manuscript; available in PMC 2011 Dec 23.

Published in final edited form as: Cell. 2010 Dec 23; 143(7): 1174–1189. doi: 10.1016/j.cell.2010.12.001

PMCID:: PMC3035969

Abstract Article PDF–2.6M

Select item 17852525.

Large-scale phosphorylation analysis of mouse liver

Judit Villén, Sean A. Beausoleil, Scott A. Gerber, Steven P. Gygi

Proc Natl Acad Sci U S A. 2007 Jan 30; 104(5): 1488–1493. Published online 2007 Jan 22. doi: 10.1073/pnas.0609836104

PMCID:: PMC1785252

Abstract Article PDF–766K

Select item 5289286.

The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)

Genome Res. 2004 Oct; 14(10b): 2121–2127. doi: 10.1101/gr.2596504

Correction in:: Genome Res. 2006 Jun; 16(6): 804.

PMCID:: PMC528928

Abstract Article PDF–140K

Select item 70102237.

PAX2 promotes epithelial ovarian cancer progression involving fatty acid metabolic reprogramming

Yan Feng, Yong Tang, Yannan Mao, Yingzhao Liu, Desheng Yao, Linkai Yang, Kenneth Garson, Barbara C. Vanderhyden, Qi Wang

Int J Oncol. 2020 Mar; 56(3): 697–708. Published online 2020 Jan 10. doi: 10.3892/ijo.2020.4958

PMCID:: PMC7010223

Abstract Article PDF–1.5M

Select item 69863608.

Redox Equivalents and Mitochondrial Bioenergetics

James R. Roede, Young-Mi Go, Dean P. Jones

Methods Mol Biol. Author manuscript; available in PMC 2020 Jan 28.

Published in final edited form as: Methods Mol Biol. 2018; 1782: 197–227. doi: 10.1007/978-1-4939-7831-1_12

PMCID:: PMC6986360

Abstract Article PDF–1.0M

Select item 69567489.

Dataset on the mass spectrometry-based proteomic profiling of the kidney from wild type and the dystrophic mdx-4cv mouse model of X-linked muscular dystrophy

Paul Dowling, Margit Zweyer, Maren Raucamp, Michael Henry, Paula Meleady, Dieter Swandulla, Kay Ohlendieck

Data Brief. 2020 Feb; 28: 105067. Published online 2020 Jan 2. doi: 10.1016/j.dib.2019.105067

PMCID:: PMC6956748

Abstract Article PDF–221K

Select item 691238510.

Suppression of the Peripheral Immune System Limits the Central Immune Response Following Cuprizone-Feeding: Relevance to Modelling Multiple Sclerosis

Monokesh K. Sen, Mohammed S. M. Almuslehi, Erika Gyengesi, Simon J. Myers, Peter J. Shortland, David A. Mahns, Jens R. Coorssen

Cells. 2019 Nov; 8(11): 1314. Published online 2019 Oct 24. doi: 10.3390/cells8111314

PMCID:: PMC6912385

Abstract Article PDF–3.5M

Select item 688488411.

Proteomic analysis of Nrk gene-disrupted placental tissue cells explains physiological significance of NRK

Kimitoshi Denda, Kanako Ida, Masataka Tanno, Kanako Nakao-Wakabayashi, Masayuki Komada, Nobuhiro Hayashi

BMC Res Notes. 2019; 12: 785. Published online 2019 Nov 29. doi: 10.1186/s13104-019-4818-7

PMCID:: PMC6884884

Abstract Article PDF–789K

Select item 683945512.

Modulation of Proteome Profile in AβPP/PS1 Mice Hippocampus, Medial Prefrontal Cortex, and Striatum by Palm Oil Derived Tocotrienol-Rich Fraction

Hamizah Shahirah Hamezah, Lina Wati Durani, Daijiro Yanagisawa, Nor Faeizah Ibrahim, Wan Mohd Aizat, Suzana Makpol, Wan Zurinah Wan Ngah, Hanafi Ahmad Damanhuri, Ikuo Tooyama

J Alzheimers Dis. 2019; 72(1): 229–246. Prepublished online 2019 Sep 23. Published online 2019 Oct 29. doi: 10.3233/JAD-181171

PMCID:: PMC6839455

Abstract Article PDF–493K

Select item 649634113.

Identification of tyrosine‐nitrated proteins in HT22 hippocampal cells during glutamate‐induced oxidative stress

S.‐W. Yoon, S. Kang, S.‐E. Ryu, H. Poo

Cell Prolif. 2010 Dec; 43(6): 584–593. Published online 2010 Oct 29. doi: 10.1111/j.1365-2184.2010.00708.x

PMCID:: PMC6496341

Abstract Article PDF–649K

Select item 594331814.

Isozyme-specific comprehensive characterization of transglutaminase-crosslinked substrates in kidney fibrosis

Hideki Tatsukawa, Risa Otsu, Yuji Tani, Ryosuke Wakita, Kiyotaka Hitomi

Sci Rep. 2018; 8: 7306. Published online 2018 May 9. doi: 10.1038/s41598-018-25674-4

PMCID:: PMC5943318

Abstract Article PDF–8.6M

Select item 590619015.

Extracellular vesicles from mice with alcoholic liver disease carry a distinct protein cargo and induce macrophage activation via Hsp90

Banishree Saha, Fatemeh Momen-Heravi, Istvan Furi, Karen Kodys, Donna Catalano, Anwesha Gangopadhyay, Reka Haraszti, Abhishek Satishchandran, Arvin Iracheta-Vellve, Adeyinka Adejumo, Scott A. Shaffer, Gyongyi Szabo

Hepatology. Author manuscript; available in PMC 2019 May 1.

Published in final edited form as: Hepatology. 2018 May; 67(5): 1986–2000. Published online 2018 Apr 6. doi: 10.1002/hep.29732

PMCID:: PMC5906190

Abstract Article PDF–2.1M

Select item 572254116.

Comparison of Echinococcus multilocularis and Echinococcus granulosus hydatid fluid proteome provides molecular strategies for specialized host-parasite interactions

Chun-Seob Ahn, Jeong-Geun Kim, Xiumin Han, Insug Kang, Yoon Kong

Oncotarget. 2017 Nov 14; 8(57): 97009–97024. Published online 2017 Sep 8. doi: 10.18632/oncotarget.20761

PMCID:: PMC5722541

Abstract Article PDF–4.1M

Select item 557125917.

Mitochondrial Respiration Is Impaired during Late-Stage Hamster Prion Infection

Robert Faris, Roger A. Moore, Anne Ward, Dan E. Sturdevant, Suzette A. Priola

J Virol. 2017 Sep 15; 91(18): e00524-17. Prepublished online 2017 Jun 28. Published online 2017 Aug 24. doi: 10.1128/JVI.00524-17

PMCID:: PMC5571259

Abstract Article PDF–3.5M

Select item 502222018.

Liver proteome of mice with different genetic susceptibilities to the effects of fluoride

Zohaib Nisar KHAN, Aline de Lima LEITE, Senda CHARONE, Isabela Tomazini SABINO, Tatiana MARTINI, Heloísa Aparecida Barbosa da Silva PEREIRA, Rodrigo Cardoso OLIVEIRA, Marília Afonso Rabelo BUZALAF

J Appl Oral Sci. 2016 May-Jun; 24(3): 250–257. doi: 10.1590/1678-775720150364

PMCID:: PMC5022220

Abstract Article PDF–212K

Select item 457377119.

Chronic intermittent ethanol exposure and withdrawal leads to adaptations in nucleus accumbens core postsynaptic density proteome and dendritic spines

Joachim D. Uys, Natalie S. McGuier, Justin T. Gass, William C. Griffin, III, Lauren E. Ball, Patrick J. Mulholland

Addict Biol. Author manuscript; available in PMC 2017 May 1.

Published in final edited form as: Addict Biol. 2016 May; 21(3): 560–574. Published online 2015 Mar 17. doi: 10.1111/adb.12238

PMCID:: PMC4573771

Abstract Article PDF–1.5M

Select item 440651820.

Comparative Proteomic Analysis of the Molecular Responses of Mouse Macrophages to Titanium Dioxide and Copper Oxide Nanoparticles Unravels Some Toxic Mechanisms for Copper Oxide Nanoparticles in Macrophages

Sarah Triboulet, Catherine Aude-Garcia, Lucie Armand, Véronique Collin-Faure, Mireille Chevallet, Hélène Diemer, Adèle Gerdil, Fabienne Proamer, Jean-Marc Strub, Aurélie Habert, Nathalie Herlin, Alain Van Dorsselaer, Marie Carrière, Thierry Rabilloud

PLoS One. 2015; 10(4): e0124496. Published online 2015 Apr 22. doi: 10.1371/journal.pone.0124496