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Items: 16

1.
GRIBCG: a software for selection of sgRNAs in the design of balancer chromosomes
Brian B. Merritt, Lily S. Cheung
BMC Bioinformatics. 2019; 20: 122. Published online 2019 Mar 12. doi: 10.1186/s12859-019-2712-x
PMCID:
PMC6416924
ArticlePDF–1.4M
2.
Identification of zebrafish steroid sulfatase and comparative analysis of the enzymatic properties with human steroid sulfatase
Katsuhisa Kurogi, Maki Yoshihama, Frederick E. Williams, Naoya Kenmochi, Yoichi Sakakibara, Masahito Suiko, Ming-Cheh Liu
J Steroid Biochem Mol Biol. Author manuscript; available in PMC 2020 Jan 1.
Published in final edited form as: J Steroid Biochem Mol Biol. 2019 Jan; 185: 110–117. Published online 2018 Aug 14. doi: 10.1016/j.jsbmb.2018.08.004
PMCID:
PMC6289849
ArticlePDF–797K
3.
BAC recombineering of the agouti loci from spotted gar and zebrafish reveals the evolutionary ancestry of dorsal-ventral pigment asymmetry in fish
Laura Cal, Manuel Megías, José Miguel Cerdá-Reverter, John H. Postlethwait, Ingo Braasch, Josep Rotllant
J Exp Zool B Mol Dev Evol. Author manuscript; available in PMC 2018 Nov 1.
Published in final edited form as: J Exp Zool B Mol Dev Evol. 2017 Nov; 328(7): 697–708. Published online 2017 May 24. doi: 10.1002/jez.b.22748
PMCID:
PMC5653409
ArticlePDF–1.9M
4.
Evolution of complexity in the zebrafish synapse proteome
Àlex Bayés, Mark O. Collins, Rita Reig-Viader, Gemma Gou, David Goulding, Abril Izquierdo, Jyoti S. Choudhary, Richard D. Emes, Seth G. N. Grant
Nat Commun. 2017; 8: 14613. Published online 2017 Mar 2. doi: 10.1038/ncomms14613
PMCID:
PMC5337974
ArticlePDF–2.0M
5.
Decellularized zebrafish cardiac extracellular matrix induces mammalian heart regeneration
William C. W. Chen, Zhouguang Wang, Maria Azzurra Missinato, Dae Woo Park, Daniel Ward Long, Heng-Jui Liu, Xuemei Zeng, Nathan A. Yates, Kang Kim, Yadong Wang
Sci Adv. 2016 Nov; 2(11): e1600844. Published online 2016 Nov 18. doi: 10.1126/sciadv.1600844
PMCID:
PMC5262469
ArticlePDF–6.6M
6.
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database
Jeremy Pasquier, Cédric Cabau, Thaovi Nguyen, Elodie Jouanno, Dany Severac, Ingo Braasch, Laurent Journot, Pierre Pontarotti, Christophe Klopp, John H. Postlethwait, Yann Guiguen, Julien Bobe
BMC Genomics. 2016; 17: 368. Published online 2016 May 18. doi: 10.1186/s12864-016-2709-z
PMCID:
PMC4870732
ArticlePDF–1.8M
7.
Evolution of the highly networked deubiquitinating enzymes USP4, USP15, and USP11
Caitlyn Vlasschaert, Xuhua Xia, Josée Coulombe, Douglas A. Gray
BMC Evol Biol. 2015; 15: 230. Published online 2015 Oct 26. doi: 10.1186/s12862-015-0511-1
PMCID:
PMC4624187
ArticlePDF–3.0M
8.
Dynamic Lkb1-TORC1 signaling as a possible mechanism for regulating the endoderm-intestine transition
Kathryn E. Marshall, Amber J. Tomasini, Khadijah Makky, Suresh Kumar, Alan N. Mayer
Dev Dyn. Author manuscript; available in PMC 2015 May 5.
Published in final edited form as: Dev Dyn. 2010 Nov; 239(11): 3000–3012. doi: 10.1002/dvdy.22437
Correction in:
volume 240 on page 459
PMCID:
PMC4420030
ArticlePDF–2.9M
9.
Phosphoproteomics-Mediated Identification of Fer Kinase as a Target of Mutant Shp2 in Noonan and LEOPARD Syndrome
Jeroen Paardekooper Overman, Christian Preisinger, Karin Prummel, Monica Bonetti, Piero Giansanti, Albert Heck, Jeroen den Hertog
PLoS One. 2014; 9(9): e106682. Published online 2014 Sep 3. doi: 10.1371/journal.pone.0106682
PMCID:
PMC4153654
ArticlePDF–12M
10.
The zebrafish reference genome sequence and its relationship to the human genome
Kerstin Howe, Matthew D. Clark, Carlos F. Torroja, James Torrance, Camille Berthelot, Matthieu Muffato, John E. Collins, Sean Humphray, Karen McLaren, Lucy Matthews, Stuart McLaren, Ian Sealy, Mario Caccamo, Carol Churcher, Carol Scott, Jeffrey C. Barrett, Romke Koch, Gerd-Jörg Rauch, Simon White, William Chow, Britt Kilian, Leonor T. Quintais, José A. Guerra-Assunção, Yi Zhou, Yong Gu, Jennifer Yen, Jan-Hinnerk Vogel, Tina Eyre, Seth Redmond, Ruby Banerjee, Jianxiang Chi, Beiyuan Fu, Elizabeth Langley, Sean F. Maguire, Gavin K. Laird, David Lloyd, Emma Kenyon, Sarah Donaldson, Harminder Sehra, Jeff Almeida-King, Jane Loveland, Stephen Trevanion, Matt Jones, Mike Quail, Dave Willey, Adrienne Hunt, John Burton, Sarah Sims, Kirsten McLay, Bob Plumb, Joy Davis, Chris Clee, Karen Oliver, Richard Clark, Clare Riddle, David Eliott, Glen Threadgold, Glenn Harden, Darren Ware, Beverly Mortimer, Giselle Kerry, Paul Heath, Benjamin Phillimore, Alan Tracey, Nicole Corby, Matthew Dunn, Christopher Johnson, Jonathan Wood, Susan Clark, Sarah Pelan, Guy Griffiths, Michelle Smith, Rebecca Glithero, Philip Howden, Nicholas Barker, Christopher Stevens, Joanna Harley, Karen Holt, Georgios Panagiotidis, Jamieson Lovell, Helen Beasley, Carl Henderson, Daria Gordon, Katherine Auger, Deborah Wright, Joanna Collins, Claire Raisen, Lauren Dyer, Kenric Leung, Lauren Robertson, Kirsty Ambridge, Daniel Leongamornlert, Sarah McGuire, Ruth Gilderthorp, Coline Griffiths, Deepa Manthravadi, Sarah Nichol, Gary Barker, Siobhan Whitehead, Michael Kay, Jacqueline Brown, Clare Murnane, Emma Gray, Matthew Humphries, Neil Sycamore, Darren Barker, David Saunders, Justene Wallis, Anne Babbage, Sian Hammond, Maryam Mashreghi-Mohammadi, Lucy Barr, Sancha Martin, Paul Wray, Andrew Ellington, Nicholas Matthews, Matthew Ellwood, Rebecca Woodmansey, Graham Clark, James Cooper, Anthony Tromans, Darren Grafham, Carl Skuce, Richard Pandian, Robert Andrews, Elliot Harrison, Andrew Kimberley, Jane Garnett, Nigel Fosker, Rebekah Hall, Patrick Garner, Daniel Kelly, Christine Bird, Sophie Palmer, Ines Gehring, Andrea Berger, Christopher M. Dooley, Zübeyde Ersan-Ürün, Cigdem Eser, Horst Geiger, Maria Geisler, Lena Karotki, Anette Kirn, Judith Konantz, Martina Konantz, Martina Oberländer, Silke Rudolph-Geiger, Mathias Teucke, Kazutoyo Osoegawa, Baoli Zhu, Amanda Rapp, Sara Widaa, Cordelia Langford, Fengtang Yang, Nigel P. Carter, Jennifer Harrow, Zemin Ning, Javier Herrero, Steve M. J. Searle, Anton Enright, Robert Geisler, Ronald H. A. Plasterk, Charles Lee, Monte Westerfield, Pieter J. de Jong, Leonard I. Zon, John H. Postlethwait, Christiane Nüsslein-Volhard, Tim J. P. Hubbard, Hugues Roest Crollius, Jane Rogers, Derek L. Stemple
Nature. Author manuscript; available in PMC 2014 Apr 25.
Published in final edited form as: Nature. 2013 Apr 25; 496(7446): 498–503. Published online 2013 Apr 17. doi: 10.1038/nature12111
Correction in:
volume 505 on page 248
PMCID:
PMC3703927
ArticlePDF–1.5M
11.
Activation of NF-κB Protein Prevents the Transition from Juvenile Ovary to Testis and Promotes Ovarian Development in Zebrafish
Ajay Pradhan, Hazem Khalaf, Scott A. Ochsner, Rajini Sreenivasan, Jarno Koskinen, Marie Karlsson, Jesper Karlsson, Neil J. McKenna, László Orbán, Per-Erik Olsson
J Biol Chem. 2012 Nov 2; 287(45): 37926–37938. Published online 2012 Sep 17. doi: 10.1074/jbc.M112.386284
PMCID:
PMC3488064
ArticlePDF–1.9M
12.
GLUT10 is required for the development of the cardiovascular system and the notochord and connects mitochondrial function to TGFβ signaling
Andy Willaert, Sandeep Khatri, Bert L. Callewaert, Paul J. Coucke, Seth D. Crosby, Joseph G. H. Lee, Elaine C. Davis, Sruti Shiva, Michael Tsang, Anne De Paepe, Zsolt Urban
Hum Mol Genet. 2012 Mar 15; 21(6): 1248–1259. Published online 2011 Nov 24. doi: 10.1093/hmg/ddr555
PMCID:
PMC3284116
ArticlePDF–455K
13.
Spatiotemporal compartmentalization of key physiological processes during muscle precursor differentiation
Ertuğrul M Özbudak, Olivier Tassy, Olivier Pourquié
Proc Natl Acad Sci U S A. 2010 Mar 2; 107(9): 4224–4229. Published online 2010 Feb 16. doi: 10.1073/pnas.0909375107
PMCID:
PMC2840138
ArticlePDF–576K
14.
The Mych Gene Is Required for Neural Crest Survival during Zebrafish Development
Sung-Kook Hong, Michael Tsang, Igor B. Dawid
PLoS One. 2008; 3(4): e2029. Published online 2008 Apr 30. doi: 10.1371/journal.pone.0002029
PMCID:
PMC2323570
ArticlePDF–413K
15.
The zebrafish gene map defines ancestral vertebrate chromosomes
Ian G. Woods, Catherine Wilson, Brian Friedlander, Patricia Chang, Daengnoy K. Reyes, Rebecca Nix, Peter D. Kelly, Felicia Chu, John H. Postlethwait, William S. Talbot
Genome Res. 2005 Sep; 15(9): 1307–1314. doi: 10.1101/gr.4134305
PMCID:
PMC1199546
ArticlePDF–595K
16.
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences
Mammalian Gene Collection (MGC) Program Team
Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899
PMCID:
PMC139241
ArticlePDF–118K

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