Entry - #617622 - JOUBERT SYNDROME 30; JBTS30 - OMIM
# 617622

JOUBERT SYNDROME 30; JBTS30


Phenotype-Gene Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Gene/Locus Gene/Locus
MIM number
2q37.1 Joubert syndrome 30 617622 AR 3 ARMC9 617612
Clinical Synopsis
 
Phenotypic Series
 

INHERITANCE
- Autosomal recessive
HEAD & NECK
Eyes
- Abnormal eye movements
- Ptosis
- Retinal dystrophy (in some patients)
RESPIRATORY
- Breathing abnormalities
- Apnea
- Tachypnea
SKELETAL
Hands
- Polydactyly, postaxial (in some patients)
MUSCLE, SOFT TISSUES
- Hypotonia
NEUROLOGIC
Central Nervous System
- Delayed psychomotor development
- Intellectual disability
- Speech delay
- Seizures (in some patients)
- Molar tooth sign on brain imaging
- Dysplasia of the superior cerebellar vermis
- Heterotopia (in some patients)
MISCELLANEOUS
- Onset at birth
- Variable extraneurologic manifestations
- No hepatic or renal involvement
MOLECULAR BASIS
- Caused by mutation in the armadillo repeat-containing protein 9 gene (ARMC9, 617612.0001)
Joubert syndrome - PS213300 - 43 Entries
Location Phenotype Inheritance Phenotype
mapping key
Phenotype
MIM number
Gene/Locus Gene/Locus
MIM number
1p36.32 Joubert syndrome 25 AR 3 616781 CEP104 616690
2q13 Joubert syndrome 4 AR 3 609583 NPHP1 607100
2q33.1 Joubert syndrome 14 AR 3 614424 TMEM237 614423
2q37.1 Joubert syndrome 30 AR 3 617622 ARMC9 617612
2q37.1 Joubert syndrome 22 AR 3 615665 PDE6D 602676
3q11.1-q11.2 Joubert syndrome 8 AR 3 612291 ARL13B 608922
4p15.32 Joubert syndrome 9 AR 3 612285 CC2D2A 612013
5p13.2 Joubert syndrome 17 AR 3 614615 CPLANE1 614571
5q23.2 Joubert syndrome 31 AR 3 617761 CEP120 613446
6q23.3 Joubert syndrome 3 AR 3 608629 AHI1 608894
7q32.2 Joubert syndrome 15 AR 3 614464 CEP41 610523
8q13.1-q13.2 Joubert syndrome 21 AR 3 615636 CSPP1 611654
8q22.1 Joubert syndrome 6 AR 3 610688 TMEM67 609884
9p21.2 Joubert syndrome 40 AR 3 619582 IFT74 608040
9q34.3 Joubert syndrome 1 AR 3 213300 INPP5E 613037
10q22.2 Joubert syndrome 36 AR 3 618763 FAM149B1 618413
10q24.1 Joubert syndrome 18 AR 3 614815 TCTN3 613847
10q24.32 Joubert syndrome 32 AR 3 617757 SUFU 607035
10q24.32 Joubert syndrome 35 AR 3 618161 ARL3 604695
11q12.2 Joubert syndrome 16 AR 3 614465 TMEM138 614459
11q12.2 Joubert syndrome 2 AR 3 608091 TMEM216 613277
11q24.2 Joubert syndrome 39 AR 3 619562 TMEM218 619285
12q21.32 Joubert syndrome 5 AR 3 610188 CEP290 610142
12q24.11 Joubert syndrome 13 AR 3 614173 TECT1 609863
12q24.31 Joubert syndrome 24 AR 3 616654 TCTN2 613846
13q21.33-q22.1 Joubert syndrome 33 AR 3 617767 PIBF1 607532
14q21.2 Joubert syndrome 37 AR 3 619185 TOGARAM1 617618
14q23.1 Joubert syndrome 23 AR 3 616490 KIAA0586 610178
15q26.1 Acrocallosal syndrome AR 3 200990 KIF7 611254
15q26.1 Joubert syndrome 12 AR 3 200990 KIF7 611254
16p12.1 Joubert syndrome 26 AR 3 616784 KATNIP 616650
16q12.1 Joubert syndrome 19 AD, AR 3 614844 ZNF423 604557
16q12.1 Nephronophthisis 14 AD, AR 3 614844 ZNF423 604557
16q12.2 Joubert syndrome 7 AR 3 611560 RPGRIP1L 610937
16q23.1 Joubert syndrome 20 AR 3 614970 TMEM231 614949
17p13.1 ?Joubert syndrome 38 AR 3 619476 KIAA0753 617112
17p13.1 ?Joubert syndrome 29 AR 3 617562 TMEM107 616183
17p13.1 Meckel syndrome 13 AR 3 617562 TMEM107 616183
17p11.2 Joubert syndrome 27 AR 3 617120 B9D1 614144
17q22 Joubert syndrome 28 AR 3 617121 MKS1 609883
19q13.2 Joubert syndrome 34 AR 3 614175 B9D2 611951
19q13.2 ?Meckel syndrome 10 AR 3 614175 B9D2 611951
Xp22.2 Joubert syndrome 10 XLR 3 300804 OFD1 300170

TEXT

A number sign (#) is used with this entry because of evidence that Joubert syndrome-30 (JBTS30) is caused by homozygous or compound heterozygous mutation in the ARMC9 gene (617612) on chromosome 2q37.

For discussion of genetic heterogeneity of Joubert syndrome, see JBTS1 (213300).


Clinical Features

Van De Weghe et al. (2017) reported 11 patients from 8 unrelated families with JBTS. Most of the families were Caucasian, but 2 families were from Saudi Arabia. Most of the patients were children, although 2 sibs were adults. The patients had typical features of Joubert syndrome, including delayed development and developmental disability, most severely affecting motor and speech, as well as abnormal eye movements, often with ptosis. Additional features were more variable, including apnea and breathing abnormalities, retinal dystrophy (2 patients), postaxial polydactyly (2 patients), and seizures (2 patients). One patient (UW349-3) had a more complex phenotype with hypopituitarism, optic nerve hypoplasia, bifid uvula, and abnormal brainstem. None of the patients had documented renal or hepatic involvement. Brain imaging showed the molar tooth sign in all patients, as well as dysplasia of the superior cerebellar folia. Less common features seen in 1 or 2 patients included Dandy-Walker malformation and heterotopia.


Inheritance

The transmission pattern of JBTS30 in the families reported by Van De Weghe et al. (2017) was consistent with autosomal recessive inheritance.


Molecular Genetics

In 11 patients from 8 unrelated families with JBTS30, Van De Weghe et al. (2017) identified 10 different homozygous or compound heterozygous mutations in the ARMC9 gene (see, e.g., 617612.0001-617612.0009). The mutations included 6 missense, 1 nonsense, 2 splice site, and 1 intragenic deletion. Mutations in the first 2 families were found by whole-exome sequencing of 53 patients from 51 families with a clinical diagnosis of Joubert syndrome in whom mutations in 28 JBTS-associated genes had been excluded. Mutations in 3 additional unrelated patients were found by targeted sequencing of the ARMC9 gene in 534 individuals from 456 families; the remaining 2 families were ascertained from a cohort of Saudi Arabian families who underwent exome sequencing. All variants were confirmed by Sanger sequencing and segregated with the disorder in all 7 families in which parental DNA was available. Several of the mutations were found at very low frequencies in the gnomAD database. Functional studies of the variants and studies of patient cells were not performed, but the mutations were predicted to result in a loss of function.


Animal Model

Van De Weghe et al. (2017) found that CRISPR/Cas9-mediated knockout of armc9 in zebrafish resulted in curved body shape, retinal dystrophy, coloboma, reduced cilia number in ventricles, and shortened cilia in photoreceptor outer segments.


REFERENCES

  1. Van De Weghe, J. C., Rusterholz, T. D. S., Latour, B., Grout, M. E., Aldinger, K. A., Shaheen, R., Dempsey, J. C., Maddirevula, S., Cheng, Y.-H. H., Phelps, I. G., Gesemann, M., Goel, H., and 13 others. Mutations in ARMC9, which encodes a basal body protein, cause Joubert syndrome in humans and ciliopathy phenotypes in zebrafish. Am. J. Hum. Genet. 101: 23-36, 2017. [PubMed: 28625504, related citations] [Full Text]


Creation Date:
Cassandra L. Kniffin : 08/13/2017
carol : 08/15/2017
ckniffin : 08/14/2017

# 617622

JOUBERT SYNDROME 30; JBTS30


ORPHA: 475;   DO: 0080275;  


Phenotype-Gene Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Gene/Locus Gene/Locus
MIM number
2q37.1 Joubert syndrome 30 617622 Autosomal recessive 3 ARMC9 617612

TEXT

A number sign (#) is used with this entry because of evidence that Joubert syndrome-30 (JBTS30) is caused by homozygous or compound heterozygous mutation in the ARMC9 gene (617612) on chromosome 2q37.

For discussion of genetic heterogeneity of Joubert syndrome, see JBTS1 (213300).


Clinical Features

Van De Weghe et al. (2017) reported 11 patients from 8 unrelated families with JBTS. Most of the families were Caucasian, but 2 families were from Saudi Arabia. Most of the patients were children, although 2 sibs were adults. The patients had typical features of Joubert syndrome, including delayed development and developmental disability, most severely affecting motor and speech, as well as abnormal eye movements, often with ptosis. Additional features were more variable, including apnea and breathing abnormalities, retinal dystrophy (2 patients), postaxial polydactyly (2 patients), and seizures (2 patients). One patient (UW349-3) had a more complex phenotype with hypopituitarism, optic nerve hypoplasia, bifid uvula, and abnormal brainstem. None of the patients had documented renal or hepatic involvement. Brain imaging showed the molar tooth sign in all patients, as well as dysplasia of the superior cerebellar folia. Less common features seen in 1 or 2 patients included Dandy-Walker malformation and heterotopia.


Inheritance

The transmission pattern of JBTS30 in the families reported by Van De Weghe et al. (2017) was consistent with autosomal recessive inheritance.


Molecular Genetics

In 11 patients from 8 unrelated families with JBTS30, Van De Weghe et al. (2017) identified 10 different homozygous or compound heterozygous mutations in the ARMC9 gene (see, e.g., 617612.0001-617612.0009). The mutations included 6 missense, 1 nonsense, 2 splice site, and 1 intragenic deletion. Mutations in the first 2 families were found by whole-exome sequencing of 53 patients from 51 families with a clinical diagnosis of Joubert syndrome in whom mutations in 28 JBTS-associated genes had been excluded. Mutations in 3 additional unrelated patients were found by targeted sequencing of the ARMC9 gene in 534 individuals from 456 families; the remaining 2 families were ascertained from a cohort of Saudi Arabian families who underwent exome sequencing. All variants were confirmed by Sanger sequencing and segregated with the disorder in all 7 families in which parental DNA was available. Several of the mutations were found at very low frequencies in the gnomAD database. Functional studies of the variants and studies of patient cells were not performed, but the mutations were predicted to result in a loss of function.


Animal Model

Van De Weghe et al. (2017) found that CRISPR/Cas9-mediated knockout of armc9 in zebrafish resulted in curved body shape, retinal dystrophy, coloboma, reduced cilia number in ventricles, and shortened cilia in photoreceptor outer segments.


REFERENCES

  1. Van De Weghe, J. C., Rusterholz, T. D. S., Latour, B., Grout, M. E., Aldinger, K. A., Shaheen, R., Dempsey, J. C., Maddirevula, S., Cheng, Y.-H. H., Phelps, I. G., Gesemann, M., Goel, H., and 13 others. Mutations in ARMC9, which encodes a basal body protein, cause Joubert syndrome in humans and ciliopathy phenotypes in zebrafish. Am. J. Hum. Genet. 101: 23-36, 2017. [PubMed: 28625504] [Full Text: https://doi.org/10.1016/j.ajhg.2017.05.010]


Creation Date:
Cassandra L. Kniffin : 08/13/2017

Edit History:
carol : 08/15/2017
ckniffin : 08/14/2017