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Status |
Public on Aug 02, 2016 |
Title |
Study of microbial functional structure in Xiangjiang River sediment |
Platform organisms |
Bacteria; Archaea; Eukaryota; Viruses |
Sample organism |
uncultured bacterium |
Experiment type |
Other
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Summary |
Xiangjiang River (Hunan, China) has been contaminated with heavy metal for several decades by surrounding factories. However, little is known about the influence of a gradient of heavy metal contamination on the diversity, structure of microbial functional gene in sediment. To deeply understand the impact of heavy metal contamination on microbial community, a comprehensive functional gene array (GeoChip 5.0) has been used to study the functional genes structure, composition, diversity and metabolic potential of microbial community from three heavy metal polluted sites of Xiangjiang River.
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Overall design |
Three groups of samples, A, B and C. Every group has 3 replicates.
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Contributor(s) |
Shiqi J, Jianyu Z |
Citation(s) |
27502206 |
Submission date |
Aug 01, 2016 |
Last update date |
Jun 27, 2019 |
Contact name |
Shiqi Jie |
E-mail(s) |
jieshiqi@hotmail.com
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Phone |
86-15111134826
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Organization name |
Central South University
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Street address |
Lushan South Road 932
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City |
Changsha |
State/province |
Hunan |
ZIP/Postal code |
410012 |
Country |
China |
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Platforms (1) |
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Samples (9)
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Relations |
BioProject |
PRJNA336047 |
Supplementary file |
Size |
Download |
File type/resource |
GSE85064_Raw_data.txt.gz |
1.2 Mb |
(ftp)(http) |
TXT |
Processed data included within Sample table |
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