NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE85064 Query DataSets for GSE85064
Status Public on Aug 02, 2016
Title Study of microbial functional structure in Xiangjiang River sediment
Platform organisms Bacteria; Archaea; Eukaryota; Viruses
Sample organism uncultured bacterium
Experiment type Other
Summary Xiangjiang River (Hunan, China) has been contaminated with heavy metal for several decades by surrounding factories. However, little is known about the influence of a gradient of heavy metal contamination on the diversity, structure of microbial functional gene in sediment. To deeply understand the impact of heavy metal contamination on microbial community, a comprehensive functional gene array (GeoChip 5.0) has been used to study the functional genes structure, composition, diversity and metabolic potential of microbial community from three heavy metal polluted sites of Xiangjiang River.
 
Overall design Three groups of samples, A, B and C. Every group has 3 replicates.
 
Contributor(s) Shiqi J, Jianyu Z
Citation(s) 27502206
Submission date Aug 01, 2016
Last update date Jun 27, 2019
Contact name Shiqi Jie
E-mail(s) jieshiqi@hotmail.com
Phone 86-15111134826
Organization name Central South University
Street address Lushan South Road 932
City Changsha
State/province Hunan
ZIP/Postal code 410012
Country China
 
Platforms (1)
GPL22263 Geochip 5.0
Samples (9)
GSM2257276 Sediment-site A-Replicate 1
GSM2257277 Sediment-site A-Replicate 2
GSM2257278 Sediment-site A-Replicate 3
Relations
BioProject PRJNA336047

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE85064_Raw_data.txt.gz 1.2 Mb (ftp)(http) TXT
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap