|
Status |
Public on May 01, 2016 |
Title |
Transcriptome anlaysis of gastrointestinal tract of pre-weaned cavles |
Organism |
Bos taurus |
Experiment type |
Expression profiling by high throughput sequencing
|
Summary |
In order to test the development of gastrointestinal tract (GIT) in pre-weaned cavles, the GIT tissues were collected from day 0, day 7, day 21 and day 42 calves. RNA-seq was used to measure the transcriptome profiles. The RNA-seq analysis revealed the fast development of small intestine and rumen tissue during the first week after birth.
|
|
|
Overall design |
The tissues of rumen (RU), mid-jejunum (MJ), distal-jejunum (DJ), ileum (IL) in day 0 (D0), day 7 (D7), day 21 (D21) and day 42 (D42) calves were collected. Their transcriptome profiles were compared to obtain the reginal and temporal differences during the pre-weaned peroid of claves.
|
|
|
Contributor(s) |
Liang G |
Citation(s) |
27515123, 31443695 |
Submission date |
Oct 23, 2015 |
Last update date |
Sep 03, 2019 |
Contact name |
Guanxiang Liang |
E-mail(s) |
liangguanxiang@gmail.com
|
Organization name |
University of Alberta
|
Street address |
410 Agriculture/Forestry Centre
|
City |
Edmonton |
State/province |
Alberta |
ZIP/Postal code |
T6G 2P5 |
Country |
Canada |
|
|
Platforms (1) |
GPL15749 |
Illumina HiSeq 2000 (Bos taurus) |
|
Samples (71)
|
|
Relations |
BioProject |
PRJNA299685 |
SRA |
SRP065213 |