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Series GSE74329 Query DataSets for GSE74329
Status Public on May 01, 2016
Title Transcriptome anlaysis of gastrointestinal tract of pre-weaned cavles
Organism Bos taurus
Experiment type Expression profiling by high throughput sequencing
Summary In order to test the development of gastrointestinal tract (GIT) in pre-weaned cavles, the GIT tissues were collected from day 0, day 7, day 21 and day 42 calves. RNA-seq was used to measure the transcriptome profiles. The RNA-seq analysis revealed the fast development of small intestine and rumen tissue during the first week after birth.
 
Overall design The tissues of rumen (RU), mid-jejunum (MJ), distal-jejunum (DJ), ileum (IL) in day 0 (D0), day 7 (D7), day 21 (D21) and day 42 (D42) calves were collected. Their transcriptome profiles were compared to obtain the reginal and temporal differences during the pre-weaned peroid of claves.
 
Contributor(s) Liang G
Citation(s) 27515123, 31443695
Submission date Oct 23, 2015
Last update date Sep 03, 2019
Contact name Guanxiang Liang
E-mail(s) liangguanxiang@gmail.com
Organization name University of Alberta
Street address 410 Agriculture/Forestry Centre
City Edmonton
State/province Alberta
ZIP/Postal code T6G 2P5
Country Canada
 
Platforms (1)
GPL15749 Illumina HiSeq 2000 (Bos taurus)
Samples (71)
GSM1917225 RU_0_1
GSM1917226 RU_0_2
GSM1917227 RU_0_3
Relations
BioProject PRJNA299685
SRA SRP065213

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE74329_RAW.tar 5.6 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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