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Series GSE67741 Query DataSets for GSE67741
Status Public on Jan 12, 2016
Title Ribosome profiling with translation inhibitors reveals pervasive translation in murine ES cells
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Other
Summary Ribosome profiling with translation inhibitors reveals pervasive translation in murine ES cells.
 
Overall design Ribosome profiling or stranded RNAseq (ribominus) with murine embryonic stem cells treated with either DMD-pateamineA, Puromycin, Harringtonine or vehicle (no drug control). Two replicates per condition.
 
Contributor(s) Waldmann R, Popa A, Lebrigand K, Barbry P
Citation(s) 26764022
Submission date Apr 10, 2015
Last update date May 15, 2019
Contact name Kevin Lebrigand
Organization name IPMC/CNRS
Lab Functional Genomics Platform of Nice-Sophia-Antipolis, France.
Street address 660 route des lucioles
City Valbonne - Sophia-Antipolis
ZIP/Postal code 06560
Country France
 
Platforms (1)
GPL18061 AB 5500xl-W Genetic Analysis System (Mus musculus)
Samples (10)
GSM1655059 Ribosome Profiling control replicate 1
GSM1655060 Ribosome Profiling control replicate 2
GSM1655061 Ribosome Profiling harringtonine replicate 1
Relations
BioProject PRJNA280809
SRA SRP057051

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE67741_RAW.tar 6.1 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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