|
| Status |
Public on Apr 14, 2010 |
| Title |
Rat Semi-Circular Canal Duct Gene Expression Studies |
| Organism |
Rattus norvegicus |
| Experiment type |
Expression profiling by array
|
| Summary |
The goal was to screen for the expressed genes in Semi-Circular Canal Duct (SCCD) that are related to ion transport and its regulation. The objectives was to discover which genes changed expression levels in response to glucocorticoids.
Keywords: drug response
|
| |
|
| Overall design |
Primary cultures were incubated for 24 hours in the presence or absence of 100 nM dexamethasone. Four independent cultures from each group were processed for total RNA and submitted for gene array analysis. Although two Samples out of four in each group were done at different time points, we found that there was not much variation between the datasets (by cluster analysis).
|
| |
|
| Contributor(s) |
Marcus DC, Raveendran NN, Pondugula SR |
| Citation(s) |
20398257 |
| Submission date |
Oct 30, 2006 |
| Last update date |
Mar 03, 2017 |
| Contact name |
Daniel Marcus |
| E-mail(s) |
marcus@vet.ksu.edu
|
| Phone |
785-532-4532
|
| Organization name |
Kansas State University
|
| Department |
Anatomy & Physiology
|
| Lab |
Cellular Biophysics lab
|
| Street address |
228 Coles Hall
|
| City |
Manhattan |
| State/province |
KS |
| ZIP/Postal code |
66506 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL341 |
[RAE230A] Affymetrix Rat Expression 230A Array |
|
| Samples (8)
|
| GSM143125 |
KSU-AP-DM Rat Semi-Circular Canal Duct C1-A |
| GSM143139 |
KSU-AP-DM Rat Semi-Circular Canal Duct C2-A |
| GSM143152 |
KSU-AP-DM Rat Semi-Circular Canal Duct C3-A |
| GSM143153 |
KSU-AP-DM Rat Semi-Circular Canal Duct C4-A |
| GSM143154 |
KSU-AP-DM Rat Semi-Circular Canal Duct D1-A |
| GSM143155 |
KSU-AP-DM Rat Semi-Circular Canal Duct D2-A |
| GSM143157 |
KSU-AP-DM Rat Semi-Circular Canal Duct D3-A |
| GSM143162 |
KSU-AP-DM Rat Semi-Circular Canal Duct D4-A |
|
| Relations |
| BioProject |
PRJNA100683 |
Less...
More...