|
| Status |
Public on Jul 26, 2011 |
| Title |
Salmonella Typhimurium: control vs. T2 toxin treatment |
| Platform organisms |
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104; Salmonella enterica subsp. enterica serovar Typhimurium str. LT2; Salmonella enterica subsp. enterica serovar Enteritidis; Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344; Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91 |
| Sample organism |
Salmonella enterica subsp. enterica serovar Typhimurium |
| Experiment type |
Expression profiling by array
|
| Summary |
Transcriptional profiling of log and stationary phases of S. Typhimurium, comparing untreated controls with T2 toxin-treated samples.
|
| |
|
| Overall design |
Each array used labelled cDNA against a common genomic DNA reference. Trplicate arrays were carried out for each of the 4 conditions: untreated log phase, untreated stationary phase, T2 toxin treated log phase and T2 toxin treated stationary phase.
|
| |
|
| Contributor(s) |
Shearer N, Thompson A, Verbrugghe E |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| Submission date |
Jul 25, 2011 |
| Last update date |
Mar 23, 2012 |
| Contact name |
Neil Shearer |
| E-mail(s) |
neil.shearer@ifr.ac.uk
|
| Organization name |
Institute of Food Research
|
| Department |
Gut Health and Food Safety
|
| Lab |
Salmonella
|
| Street address |
Colney Lane
|
| City |
Norwich |
| State/province |
Norfolk |
| ZIP/Postal code |
NR47UA |
| Country |
United Kingdom |
| |
|
| Platforms (1) |
| GPL13609 |
SALSA 2 IFR Salmonella 8K Arrays |
|
| Samples (12)
|
| GSM766479 |
Untreated stationary phase, rep1 |
| GSM766480 |
Untreated stationary phase, rep2 |
| GSM766481 |
Untreated stationary phase, rep3 |
| GSM766497 |
T2 toxin treated log phase, rep1 |
| GSM766498 |
T2 toxin treated log phase, rep2 |
| GSM766499 |
T2 toxin treated log phase, rep3 |
| GSM766500 |
T2 toxin treated stationary phase, rep1 |
| GSM766501 |
T2 toxin treated stationary phase, rep2 |
| GSM766502 |
T2 toxin treated stationary phase, rep3 |
|
| Relations |
| BioProject |
PRJNA146273 |
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