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Series GSE24999 Query DataSets for GSE24999
Status Public on Aug 18, 2011
Title dRNA-Seq of Chlamydia pneumoniae
Organism Chlamydia pneumoniae CWL029
Experiment type Expression profiling by high throughput sequencing
Summary The obligate intracellular human pathogen Chlamydia pneumoniae was subjected to dRNA-Seq to gain insights into the transcriptome. The two distinct life cycle forms elementary bodies (EB) and reticulate bodies (RB) were isolated from human Hep2 cell line by differential gradient centrifugation.
 
Overall design Total RNA was isolated and partially treated with Terminator Exonuclease to digest RNA without 5'-PPP and thereby enrich for native 5' ends.
 
Contributor(s) Albrecht M, Sharma CM, Reinhardt R, Vogel J, Rudel T
Citation(s) 21989159
Submission date Oct 28, 2010
Last update date May 15, 2019
Contact name Marco Albrecht
E-mail(s) marco.albrecht@uni-wuerzburg.de
Phone +49 931 3184413
Fax +49 931 3184402
Organization name University of Würzburg
Department Department of Microbiology
Lab Rudel lab
Street address Am Hubland
City Würzburg
ZIP/Postal code 97074
Country Germany
 
Platforms (1)
GPL11140 454 GS (Chlamydophila pneumoniae CWL029)
Samples (8)
GSM613995 EB-: total RNA (ACGTGC)
GSM613996 EB-: total RNA (GTAT)
GSM613997 EB+: RNA enriched for native 5' (GTGA)
Relations
SRA SRP004041
BioProject PRJNA131985

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE24999_RAW.tar 53.0 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Processed data provided as supplementary file
Raw data are available in SRA

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