NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE17929 Query DataSets for GSE17929
Status Public on Sep 04, 2009
Title Expression data from rat (Sprague Dawley) brain subjected to MCAo.
Organism Rattus norvegicus
Experiment type Expression profiling by array
Summary Middle cerebral artery occlusion (MCAo) in rat represent the ischemic stroke in human. Rodents subjected to MCAo and treated with venom phospholipase A2 showed reduction in infarct volume after 24hours of stroke.
We studied the global gene expression of the reduction in infarct volume using Affymetrix Gene Chips. We analysed all the genes that were up or down regulated in the study.
 
Overall design Total RNA isolated from sham, MCAo and MCAo+nPLA rat brains, was pooled to minimize inter-individual variation and hybridized to each array of the RAE-230A or U34A GeneChipTM according to protocols described in the GeneChipTM expression analysis package (Affymetrix, CA).
 
Contributor(s) Armugam A
Citation(s) 19775433
Submission date Sep 01, 2009
Last update date Mar 03, 2017
Contact name Kandiah Jeyaseelan
E-mail(s) erijeya@nus.edu.sg
Organization name National University of Singapore
Department Biochemistry
Street address 8 Medical Drive
City Singapore
ZIP/Postal code 117597
Country Singapore
 
Platforms (2)
GPL85 [RG_U34A] Affymetrix Rat Genome U34 Array
GPL341 [RAE230A] Affymetrix Rat Expression 230A Array
Samples (8)
GSM447892 Sham operated biological rep1
GSM447893 Sham operated biological rep2
GSM447894 MCAo biological rep1
Relations
BioProject PRJNA119867

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE17929_RAW.tar 15.6 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap