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    LOC103091832 deleted in malignant brain tumors 1 protein [ Petromyzon marinus (sea lamprey) ]

    Gene ID: 103091832, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC103091832
    Gene description
    deleted in malignant brain tumors 1 protein
    See related
    EnsemblRapid:ENSPMAG00000002042
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Petromyzon marinus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Cyclostomata; Hyperoartia; Petromyzontiformes; Petromyzontidae; Petromyzon
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    Genomic context

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    See LOC103091832 in Genome Data Viewer
    Location:
    chromosome: 21
    Exon count:
    31
    Annotation release Status Assembly Chr Location
    100 current kPetMar1.pri (GCF_010993605.1) 21 NC_046089.1 (3373711..3433059, complement)

    Chromosome 21 - NC_046089.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116944369 Neighboring gene uncharacterized LOC116944405 Neighboring gene beta-galactoside alpha-2,6-sialyltransferase 2-like Neighboring gene CCR4-NOT transcription complex subunit 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_046089.1 Chromosome 21 Reference kPetMar1.pri Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A cDNA clone from the sea lamprey Petromyzon marinus coding for a scavenger receptor Cys-rich (SRCR) domain protein. Mayer WE, et al. Gene, 1995 Oct 27. PMID 7590341

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    deleted in malignant brain tumors 1 protein
    Names
    Pema-SRCR protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Petromyzon marinus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference kPetMar1.pri Primary Assembly

    Genomic

    1. NC_046089.1 Reference kPetMar1.pri Primary Assembly

      Range
      3373711..3433059 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032957929.1 → XP_032813820.1  deleted in malignant brain tumors 1 protein

      UniProtKB/TrEMBL
      Q92098
      Related
      ENSPMAP00000035921.1, ENSPMAT00000021794.1
      Conserved Domains (3) summary
      smart00202
      Location:466 → 565
      SR; Scavenger receptor Cys-rich
      smart00241
      Location:592 → 826
      ZP; Zona pellucida (ZP) domain
      cd00054
      Location:182 → 213
      EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    Nucleotide Protein
    Heading Accession and Version

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