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    pgkA calmodulin-binding protein [ Dictyostelium discoideum AX4 ]

    Gene ID: 8626225, updated on 17-May-2024

    Summary

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    Gene symbol
    pgkA
    Gene description
    calmodulin-binding protein
    Primary source
    dictyBase:DDB_G0287595
    Locus tag
    DDB_G0287595
    Gene type
    protein coding
    RNA name
    phosphoglycerate kinase
    RefSeq status
    PROVISIONAL
    Organism
    Dictyostelium discoideum AX4 (strain: AX4)
    Lineage
    Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium
    Old locus tag
    DDBDRAFT_0187559; DDBDRAFT_0191349; DDB_0187559; DDB_0191349
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_007091.3 (494968..496392, complement)

    Chromosome 5 - NC_007091.3Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene mitochondrial import inner membrane translocase subunit 17 Neighboring gene hypothetical protein Neighboring gene IQGAP-related protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_007091.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Calmodulin binds to and inhibits the activity of phosphoglycerate kinase. Myre MA, et al. Biochim Biophys Acta, 2004 Sep 17. PMID 15363631
    2. Proteomic analysis of Legionella-containing phagosomes isolated from Dictyostelium. Shevchuk O, et al. Int J Med Microbiol, 2009 Nov. PMID 19482547
    3. Proteomics fingerprinting of phagosome maturation and evidence for the role of a Galpha during uptake. Gotthardt D, et al. Mol Cell Proteomics, 2006 Dec. PMID 16926386
    4. The genome of the social amoeba Dictyostelium discoideum. Eichinger L, et al. Nature, 2005 May 5. PMID 15875012, Free PMC Article
    5. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Gene Ontology Provided by dictyBase

    Function Evidence Code Pubs
    enables ADP binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables ATP binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables calmodulin binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables calmodulin binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables calmodulin binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables calmodulin binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables phosphoglycerate kinase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables phosphoglycerate kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables phosphoglycerate kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in gluconeogenesis IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    acts_upstream_of_or_within gluconeogenesis ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    involved_in glycolytic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in glycolytic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within glycolytic process ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IC
    Inferred by Curator
    more info
    		  
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in phagocytic vesicle HDA PubMed 

    General protein information

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    Names
    calmodulin-binding protein
    phosphoglycerate kinase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_007091.3 Reference assembly

      Range
      494968..496392 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_632038.1 → XP_637130.1  phosphoglycerate kinase [Dictyostelium discoideum AX4]

      See identical proteins and their annotated locations for XP_637130.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q54K34, Q9GPM4
      Conserved Domains (1) summary
      PTZ00005
      Location:5 → 419
      PTZ00005; phosphoglycerate kinase; Provisional
    Nucleotide Protein
    Heading Accession and Version

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