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    CNPV272 C-type lectin-like protein [ Canarypox virus ]

    Gene ID: 2700350, updated on 18-Aug-2023

    Summary

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    Gene symbol
    CNPV272
    Gene description
    C-type lectin-like protein
    Locus tag
    CNPV272
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Canarypox virus (strain: ATCC VR-111, isolate: Wheatley C93)
    Lineage
    Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes; Chitovirales; Poxviridae; Chordopoxvirinae; Avipoxvirus
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    Genomic context

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    Sequence:
    NC_005309.1 (301822..302367)

    NC_005309.1Genomic Context describing neighboring genes Neighboring gene CNPV269 conserved hypothetical protein Neighboring gene hypothetical protein Neighboring gene CNPV271 DNA packaging protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_005309.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The genome of canarypox virus. Tulman ER, et al. J Virol, 2004 Jan. PMID 14671117, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    C-type lectin-like protein
    NP_955295.1
    • C-type lectin protein; although many lectins are carbohydrate-binding proteins, they can be involved in protein-protein, protein-lipid or protein-nucleic acid interactions; C-type lectins are Ca+ dependent proteins; The poxviridae are enveloped unsegmented dsDNA viruses; unlike many dsDNA viruses that replicate in the host nucleus poxviruses encode their own replication machinery and therefore replicate in the cytoplasm; viral genes are expressed in a bi-phasic manner with early genes encoding non-structural proteins involved in genome replication and late genes encoding the viral structural proteins; Canarypox and Fowlpox are members of the Avipoxvirus genus and infect nonmammalian hosts; Fowlpox virus infects chickens and turkeys while Canarypox has a broader host-range and infects passeriform (song) birds

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_005309.1 Reference assembly

      Range
      301822..302367
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_955295.1 C-type lectin-like protein [Canarypox virus]

      See identical proteins and their annotated locations for NP_955295.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A1V0QGM2, Q6VZ75
      Conserved Domains (1) summary
      PHA03097
      Location:16 → 181
      PHA03097; C-type lectin-like protein; Provisional
    Nucleotide Protein
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