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    tlr22 toll-like receptor 22 [ Carassius auratus (goldfish) ]

    Gene ID: 113070066, updated on 15-Mar-2024

    Summary

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    Gene symbol
    tlr22
    Gene description
    toll-like receptor 22
    See related
    Ensembl:ENSCARG00000057902
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Carassius auratus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Carassius
    Also known as
    Tlr
    Orthologs
    zebrafish all
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    Genomic context

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    See tlr22 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    100 current ASM336829v1 (GCF_003368295.1) Unplaced Scaffold NW_020523497.1 (350832..361385, complement)

    NW_020523497.1Genomic Context describing neighboring genes Neighboring gene HEAT repeat containing 6 Neighboring gene HNF1 homeobox Bb Neighboring gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 Neighboring gene uncharacterized LOC113070051 Neighboring gene TNF receptor-associated factor 4-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020523497 Unplaced Scaffold Reference ASM336829v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Molecular characterization and expression analysis of toll-like receptors 5 and 22 from natural triploid Carassius auratus. Zhang J, et al. Fish Shellfish Immunol, 2017 May. PMID 28259778
    2. A toll-like receptor (TLR) gene that is up-regulated in activated goldfish macrophages. Stafford JL, et al. Dev Comp Immunol, 2003 Sep. PMID 12798365

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transmembrane signaling receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in inflammatory response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in toll-like receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    toll-like receptor 13

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Carassius auratus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM336829v1 Primary Assembly

    Genomic

    1. NW_020523497.1 Reference ASM336829v1 Primary Assembly

      Range
      350832..361385 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_026243228.1 → XP_026099013.1  toll-like receptor 13

      UniProtKB/TrEMBL
      A0A6P6MRH5, Q801F9
      Related
      ENSCARP00000112368.1, ENSCART00000125708.1
    Nucleotide Protein Strain
    Heading Accession and Version

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