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    AFF2 ALF transcription elongation factor 2 [ Felis catus (domestic cat) ]

    Gene ID: 101092251, updated on 8-Mar-2024

    Summary

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    Official Symbol
    AFF2
    Official Full Name
    ALF transcription elongation factor 2
    Primary source
    VGNC:VGNC:59668
    See related
    EnsemblRapid:ENSFCTG00005005857
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Felis catus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
    Orthologs
    human mouse all
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    Genomic context

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    See AFF2 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) X NC_058386.1 (121278088..121734026)
    104 previous assembly Felis_catus_9.0 (GCF_000181335.3) X NC_018741.3 (124050517..124511205)

    Chromosome X - NC_058386.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA70 Neighboring gene 60S ribosomal protein L31-like Neighboring gene uncharacterized LOC123383474 Neighboring gene uncharacterized protein CXorf51A-like Neighboring gene uncharacterized LOC109496640

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables G-quadruplex RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of RNA splicing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nuclear speck IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    AF4/FMR2 family member 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference F.catus_Fca126_mat1.0 Primary Assembly

    Genomic

    1. NC_058386.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

      Range
      121278088..121734026
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023249262.2 → XP_023105030.2  AF4/FMR2 family member 2 isoform X1

      UniProtKB/TrEMBL
      A0A337SL81
      Conserved Domains (1) summary
      PRK12372
      Location:820 → 909
      PRK12372; ribonuclease III; Reviewed

    2. XM_023249264.2 → XP_023105032.2  AF4/FMR2 family member 2 isoform X3

      UniProtKB/TrEMBL
      A0A337SL81
      Conserved Domains (1) summary
      PRK12372
      Location:814 → 903
      PRK12372; ribonuclease III; Reviewed

    3. XM_023249266.2 → XP_023105034.2  AF4/FMR2 family member 2 isoform X5

      UniProtKB/TrEMBL
      M3W1L7
      Conserved Domains (1) summary
      PRK12372
      Location:791 → 880
      PRK12372; ribonuclease III; Reviewed

    4. XM_023249268.2 → XP_023105036.2  AF4/FMR2 family member 2 isoform X7

      UniProtKB/TrEMBL
      M3W1L7
      Conserved Domains (1) summary
      PRK12372
      Location:785 → 874
      PRK12372; ribonuclease III; Reviewed

    5. XM_023249263.2 → XP_023105031.2  AF4/FMR2 family member 2 isoform X2

      UniProtKB/TrEMBL
      A0A337SL81
      Related
      ENSFCTP00005011264.1, ENSFCTT00005016443.1
      Conserved Domains (1) summary
      PRK12372
      Location:816 → 905
      PRK12372; ribonuclease III; Reviewed

    6. XM_023249265.2 → XP_023105033.2  AF4/FMR2 family member 2 isoform X4

      UniProtKB/TrEMBL
      A0A337SL81
      Related
      ENSFCTP00005011239.1, ENSFCTT00005016417.1
      Conserved Domains (1) summary
      PRK12372
      Location:810 → 899
      PRK12372; ribonuclease III; Reviewed

    7. XM_023249267.2 → XP_023105035.2  AF4/FMR2 family member 2 isoform X6

      UniProtKB/TrEMBL
      M3W1L7
      Related
      ENSFCTP00005011283.1, ENSFCTT00005016465.1
      Conserved Domains (1) summary
      PRK12372
      Location:787 → 876
      PRK12372; ribonuclease III; Reviewed

    8. XM_023249269.2 → XP_023105037.2  AF4/FMR2 family member 2 isoform X8

      UniProtKB/TrEMBL
      M3W1L7
      Related
      ENSFCTP00005011313.1, ENSFCTT00005016503.1
      Conserved Domains (1) summary
      PRK12372
      Location:781 → 870
      PRK12372; ribonuclease III; Reviewed

    9. XM_045051080.1 → XP_044907015.1  AF4/FMR2 family member 2 isoform X10

      UniProtKB/TrEMBL
      A0A5F5XHJ7
      Conserved Domains (1) summary
      PRK12372
      Location:529 → 618
      PRK12372; ribonuclease III; Reviewed

    10. XM_045051081.1 → XP_044907016.1  AF4/FMR2 family member 2 isoform X11

      Conserved Domains (1) summary
      PRK12372
      Location:500 → 589
      PRK12372; ribonuclease III; Reviewed

    11. XM_045051079.1 → XP_044907014.1  AF4/FMR2 family member 2 isoform X9

      UniProtKB/TrEMBL
      A0A337SL81
      Related
      ENSFCTP00005011223.1, ENSFCTT00005016401.1
      Conserved Domains (1) summary
      PRK12372
      Location:740 → 829
      PRK12372; ribonuclease III; Reviewed
    Nucleotide Protein
    Heading Accession and Version

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