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    Tpm2 tropomyosin 2 [ Arvicanthis niloticus (Nile rat) ]

    Gene ID: 117708521, updated on 19-Mar-2024

    Summary

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    Gene symbol
    Tpm2
    Gene description
    tropomyosin 2
    See related
    EnsemblRapid:ENSANLG00005007288
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Arvicanthis niloticus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Arvicanthis
    Orthologs
    human mouse all
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    Genomic context

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    See Tpm2 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    100 current mArvNil1.pat.X (GCF_011762505.1) 5 NC_047662.1 (100792302..100801320)

    Chromosome 5 - NC_047662.1Genomic Context describing neighboring genes Neighboring gene glucosylceramidase beta 2 Neighboring gene cAMP responsive element binding protein 3 Neighboring gene talin 1 Neighboring gene carbonic anhydrase 9 Neighboring gene Rho guanine nucleotide exchange factor 39

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_047662.1 Chromosome 5 Reference mArvNil1.pat.X

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin filament binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in actin filament organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in muscle contraction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in actin filament IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tropomyosin beta chain

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Arvicanthis niloticus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mArvNil1.pat.X

    Genomic

    1. NC_047662.1 Reference mArvNil1.pat.X

      Range
      100792302..100801320
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_034502248.1 → XP_034358139.1  tropomyosin beta chain isoform X1

      Related
      ENSANLP00005009052.1, ENSANLT00005010303.1
      Conserved Domains (1) summary
      pfam00261
      Location:48 → 282
      Tropomyosin

    2. XM_034502250.1 → XP_034358141.1  tropomyosin beta chain isoform X2

      Related
      ENSANLP00005009043.1, ENSANLT00005010294.1
      Conserved Domains (1) summary
      pfam00261
      Location:48 → 282
      Tropomyosin

    3. XM_034502252.1 → XP_034358143.1  tropomyosin beta chain isoform X4

      Related
      ENSANLP00005009038.1, ENSANLT00005010288.1
      Conserved Domains (1) summary
      pfam00261
      Location:48 → 282
      Tropomyosin

    4. XM_034502251.1 → XP_034358142.1  tropomyosin beta chain isoform X3

      Conserved Domains (1) summary
      pfam00261
      Location:48 → 282
      Tropomyosin
    Nucleotide Protein
    Heading Accession and Version

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