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    ankrd7 ankyrin repeat domain 7 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100379673, updated on 8-Mar-2024

    Summary

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    Official Symbol
    ankrd7provided by Xenbase
    Official Full Name
    ankyrin repeat domain 7provided by Xenbase
    Primary source
    Xenbase:XB-GENE-940846
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Orthologs
    human all
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    Genomic context

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    See ankrd7 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    40
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 3 NC_030679.2 (68695949..68760006, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 3 NC_030679.1 (59138620..59199453, complement)

    Chromosome 3 - NC_030679.2Genomic Context describing neighboring genes Neighboring gene cortactin binding protein 2 Neighboring gene LSM8 homolog, U6 small nuclear RNA associated Neighboring gene potassium channel, voltage gated Shal related subfamily D, member 2 Neighboring gene tetraspanin 12

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    ankyrin repeat domain-containing protein 26

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030679.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      68695949..68760006 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031898974.1 → XP_031754834.1  ankyrin repeat domain-containing protein 26 isoform X2

      UniProtKB/TrEMBL
      A0A8J1JAE0
      Conserved Domains (5) summary
      COG1196
      Location:1232 → 2062
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      sd00045
      Location:133 → 164
      ANK; ANK repeat [structural motif]
      pfam12001
      Location:2119 → 2239
      DUF3496; Domain of unknown function (DUF3496)
      pfam14915
      Location:1402 → 1706
      CCDC144C; CCDC144C protein coiled-coil region
      cl39094
      Location:40 → 231
      Ank_2; Ankyrin repeats (3 copies)

    2. XM_031898973.1 → XP_031754833.1  ankyrin repeat domain-containing protein 26 isoform X1

      UniProtKB/TrEMBL
      A0A8J1JAD4
      Conserved Domains (5) summary
      COG1196
      Location:1239 → 2069
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      sd00045
      Location:133 → 164
      ANK; ANK repeat [structural motif]
      pfam12001
      Location:2126 → 2246
      DUF3496; Domain of unknown function (DUF3496)
      pfam14915
      Location:1409 → 1713
      CCDC144C; CCDC144C protein coiled-coil region
      cl39094
      Location:40 → 231
      Ank_2; Ankyrin repeats (3 copies)

    3. XM_012959953.3 → XP_012815407.2  ankyrin repeat domain-containing protein 26 isoform X4

      UniProtKB/TrEMBL
      A0A8J0SII8
      Conserved Domains (5) summary
      COG1196
      Location:1212 → 2042
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      sd00045
      Location:133 → 164
      ANK; ANK repeat [structural motif]
      pfam12001
      Location:2099 → 2219
      DUF3496; Domain of unknown function (DUF3496)
      pfam14915
      Location:1382 → 1686
      CCDC144C; CCDC144C protein coiled-coil region
      cl39094
      Location:40 → 231
      Ank_2; Ankyrin repeats (3 copies)

    4. XM_031898975.1 → XP_031754835.1  ankyrin repeat domain-containing protein 26 isoform X3

      UniProtKB/TrEMBL
      A0A8J1JCV5
      Conserved Domains (5) summary
      COG1196
      Location:1218 → 2048
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      sd00045
      Location:133 → 164
      ANK; ANK repeat [structural motif]
      pfam12001
      Location:2105 → 2225
      DUF3496; Domain of unknown function (DUF3496)
      pfam14915
      Location:1388 → 1692
      CCDC144C; CCDC144C protein coiled-coil region
      cl39094
      Location:40 → 231
      Ank_2; Ankyrin repeats (3 copies)

    5. XM_031898977.1 → XP_031754837.1  ankyrin repeat domain-containing protein 26 isoform X6

      UniProtKB/TrEMBL
      A0A8J1JAD6
      Conserved Domains (5) summary
      COG1196
      Location:905 → 1735
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      sd00045
      Location:133 → 164
      ANK; ANK repeat [structural motif]
      pfam12001
      Location:1792 → 1899
      DUF3496; Domain of unknown function (DUF3496)
      pfam14915
      Location:1075 → 1379
      CCDC144C; CCDC144C protein coiled-coil region
      cl39094
      Location:40 → 231
      Ank_2; Ankyrin repeats (3 copies)

    6. XM_031898976.1 → XP_031754836.1  ankyrin repeat domain-containing protein 26 isoform X5

      UniProtKB/TrEMBL
      A0A8J1JDW7
      Conserved Domains (5) summary
      COG1196
      Location:912 → 1742
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      sd00045
      Location:133 → 164
      ANK; ANK repeat [structural motif]
      pfam12001
      Location:1799 → 1919
      DUF3496; Domain of unknown function (DUF3496)
      pfam14915
      Location:1082 → 1386
      CCDC144C; CCDC144C protein coiled-coil region
      cl39094
      Location:40 → 231
      Ank_2; Ankyrin repeats (3 copies)
    Nucleotide Protein Strain
    Heading Accession and Version

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