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    CCDC82 coiled-coil domain containing 82 [ Bos taurus (cattle) ]

    Gene ID: 511627, updated on 6-Jun-2024

    Summary

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    Official Symbol
    CCDC82provided by VGNC
    Official Full Name
    coiled-coil domain containing 82provided by VGNC
    Primary source
    VGNC:VGNC:26920
    See related
    Ensembl:ENSBTAG00000006581
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See CCDC82 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 15 NC_037342.1 (13851990..13883715)

    Chromosome 15 - NC_037342.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132342278 Neighboring gene JRK like Neighboring gene microRNA mir-1260b Neighboring gene mastermind like transcriptional coactivator 2 Neighboring gene uncharacterized LOC112441603

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037342.1 Chromosome 15 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC137636

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    coiled-coil domain-containing protein 82

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001046094.2 → NP_001039559.2  coiled-coil domain-containing protein 82

      Status: VALIDATED

      Source sequence(s)
      AM006561, AM037854, CK974991, EE386336
      UniProtKB/TrEMBL
      A0AAA9RRZ5
      Related
      ENSBTAP00000008639.6, ENSBTAT00000008639.6
      Conserved Domains (2) summary
      pfam13846
      Location:93 → 208
      DUF4196; Domain of unknown function (DUF4196)
      pfam13926
      Location:279 → 434
      DUF4211; Domain of unknown function (DUF4211)

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037342.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      13851990..13883715
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059874660.1 → XP_059730643.1  coiled-coil domain-containing protein 82 isoform X1

      UniProtKB/TrEMBL
      A0AAA9RRZ5, F1MEZ4

    2. XM_059874662.1 → XP_059730645.1  coiled-coil domain-containing protein 82 isoform X2

      UniProtKB/TrEMBL
      A0A3Q1N0V4, A0AAA9RRZ5
      Related
      ENSBTAP00000062445.1, ENSBTAT00000067479.2

    3. XM_024975182.2 → XP_024830950.1  coiled-coil domain-containing protein 82 isoform X1

      UniProtKB/TrEMBL
      A0AAA9RRZ5, F1MEZ4
      Conserved Domains (2) summary
      pfam13846
      Location:93 → 208
      DUF4196; Domain of unknown function (DUF4196)
      pfam13926
      Location:279 → 427
      DUF4211; Domain of unknown function (DUF4211)

    4. XM_005215757.5 → XP_005215814.2  coiled-coil domain-containing protein 82 isoform X1

      UniProtKB/TrEMBL
      A0AAA9RRZ5, F1MEZ4
      Conserved Domains (2) summary
      pfam13846
      Location:93 → 208
      DUF4196; Domain of unknown function (DUF4196)
      pfam13926
      Location:279 → 427
      DUF4211; Domain of unknown function (DUF4211)

    5. XM_015474598.3 → XP_015330084.2  coiled-coil domain-containing protein 82 isoform X1

      UniProtKB/TrEMBL
      A0AAA9RRZ5, F1MEZ4
      Conserved Domains (2) summary
      pfam13846
      Location:93 → 208
      DUF4196; Domain of unknown function (DUF4196)
      pfam13926
      Location:279 → 427
      DUF4211; Domain of unknown function (DUF4211)

    6. XM_059874661.1 → XP_059730644.1  coiled-coil domain-containing protein 82 isoform X1

      UniProtKB/TrEMBL
      A0AAA9RRZ5, F1MEZ4
    Nucleotide Protein Strain
    Heading Accession and Version

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