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    Erich6b glutamate rich 6B [ Mus musculus (house mouse) ]

    Gene ID: 75272, updated on 5-Mar-2024

    Summary

    Official Symbol
    Erich6bprovided by MGI
    Official Full Name
    glutamate rich 6Bprovided by MGI
    Primary source
    MGI:MGI:1922522
    See related
    Ensembl:ENSMUSG00000022002 AllianceGenome:MGI:1922522
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm46471; 4930564B18Rik
    Summary
    Orthologous to human ERICH6B (glutamate rich 6B). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in testis adult (RPKM 1.1) and kidney adult (RPKM 0.3) See more
    Orthologs
    NEW
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    Genomic context

    See Erich6b in Genome Data Viewer
    Location:
    14 D3; 14 40.28 cM
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (75879662..75934165)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (75642222..75696725)

    Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 36060 Neighboring gene chibby family member 2 Neighboring gene predicted gene, 36219 Neighboring gene predicted gene, 23622 Neighboring gene component of oligomeric golgi complex 3 Neighboring gene STARR-seq mESC enhancer starr_37146 Neighboring gene solute carrier family 25, member 30 Neighboring gene STARR-positive B cell enhancer ABC_E9050

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001369022.1NP_001355951.1  glutamate-rich protein 6B isoform 1

      Status: VALIDATED

      Source sequence(s)
      AC122285, AC125205
      Consensus CDS
      CCDS88716.1
      UniProtKB/TrEMBL
      A0A571BEV3
      Related
      ENSMUSP00000158673.2, ENSMUST00000238633.2
      Conserved Domains (1) summary
      pfam14977
      Location:352547
      FAM194; FAM194 protein
    2. NM_029230.1NP_083506.1  glutamate-rich protein 6B isoform 2

      See identical proteins and their annotated locations for NP_083506.1

      Status: VALIDATED

      Source sequence(s)
      AK016216
      Consensus CDS
      CCDS56969.1
      UniProtKB/TrEMBL
      Q9D4S6
      Related
      ENSMUSP00000022579.2, ENSMUST00000022579.2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000080.7 Reference GRCm39 C57BL/6J

      Range
      75879662..75934165
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)