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    zpd.L zona pellucida protein D L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 397832, updated on 11-Apr-2024

    Summary

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    Official Symbol
    zpd.L
    Official Full Name
    zona pellucida protein D L homeolog
    Primary source
    Xenbase:XB-GENE-5847390
    Locus tag
    XELAEV_18022851mg
    See related
    EnsemblRapid:ENSXLAG00005017227
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    zpd
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    Genomic context

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    See zpd.L in Genome Data Viewer
    Location:
    chromosome: 4L
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 4L NC_054377.1 (70517823..70526990)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 4L NC_030730.1 (65277076..65286109)

    Chromosome 4L - NC_054377.1Genomic Context describing neighboring genes Neighboring gene katanin regulatory subunit B1 L homeolog Neighboring gene dynein regulatory complex subunit 7 L homeolog Neighboring gene adhesion G protein-coupled receptor G1 L homeolog Neighboring gene coiled-coil domain containing 102A L homeolog Neighboring gene docking protein 4 L homeolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification and characterization of a unique Xenopus laevis egg envelope component, ZPD. Lindsay LL, et al. Dev Growth Differ, 2002 Jun. PMID 12060070
    2. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Component Evidence Code Pubs
    located_in cell surface IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    zona pellucida protein D L homeolog
    Names
    zona pellucida glycoprotein homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001087962.1 → NP_001081431.1  zona pellucida protein D L homeolog precursor

      See identical proteins and their annotated locations for NP_001081431.1

      Status: PROVISIONAL

      Source sequence(s)
      U44949
      UniProtKB/TrEMBL
      A9ULW6, Q91672
      Related
      ENSXLAP00005050803.1, ENSXLAT00005051965.1
      Conserved Domains (2) summary
      smart00241
      Location:37 → 290
      ZP; Zona pellucida (ZP) domain
      pfam00100
      Location:173 → 284
      Zona_pellucida; Zona pellucida-like domain

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054377.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      70517823..70526990
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018256519.2 → XP_018112008.1  zona pellucida protein D L homeolog isoform X1

      UniProtKB/TrEMBL
      A0A1L8GLI1, A0A974HNS3, A9ULW6

    2. XM_018256521.2 → XP_018112010.1  zona pellucida protein D L homeolog isoform X1

      UniProtKB/TrEMBL
      A0A1L8GLI1, A0A974HNS3, A9ULW6
      Related
      ENSXLAP00005050797.1, ENSXLAT00005051959.1

    3. XM_018256520.2 → XP_018112009.1  zona pellucida protein D L homeolog isoform X1

      UniProtKB/TrEMBL
      A0A1L8GLI1, A0A974HNS3, A9ULW6
    Nucleotide Protein Strain
    Heading Accession and Version

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