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    LINJ_01_0830 putative calcium/potassium channel (CAKC) [ Leishmania infantum JPCM5 ]

    Gene ID: 5066111, updated on 28-Dec-2023

    Summary

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    Gene symbol
    LINJ_01_0830
    Gene description
    putative calcium/potassium channel (CAKC)
    Locus tag
    LINJ_01_0830
    Gene type
    protein coding
    RNA name
    putative calcium/potassium channel (CAKC)
    RefSeq status
    PROVISIONAL
    Organism
    Leishmania infantum JPCM5 (strain: JPCM5)
    Lineage
    Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    1
    Sequence:
    Chromosome: 1; NC_009386.2 (252395..255448)

    Chromosome 1 - NC_009386.2Genomic Context describing neighboring genes Neighboring gene conserved hypothetical protein Neighboring gene conserved hypothetical protein Neighboring gene potassium channel subunit-like protein Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009386.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comparative genomic analysis of three Leishmania species that cause diverse human disease. Peacock CS, et al. Nat Genet, 2007 Jul. PMID 17572675, Free PMC Article
    2. Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania. Rogers MB, et al. Genome Res, 2011 Dec. PMID 22038252, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in potassium ion transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    putative calcium/potassium channel (CAKC)

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_009386.2 Reference assembly

      Range
      252395..255448
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001462659.1 → XP_001462696.1  putative calcium/potassium channel (CAKC) [Leishmania infantum JPCM5]

      See identical proteins and their annotated locations for XP_001462696.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2K4YK26, A0A381M933, A0A6L0WGT3, A4HRK4
      Conserved Domains (4) summary
      PRK10537
      Location:218 → 377
      PRK10537; voltage-gated potassium channel protein
      pfam03493
      Location:421 → 517
      BK_channel_a; Calcium-activated BK potassium channel alpha subunit
      pfam07885
      Location:198 → 273
      Ion_trans_2; Ion channel
      cl00478
      Location:86 → 145
      LGT; Prolipoprotein diacylglyceryl transferase
    Nucleotide Protein
    Heading Accession and Version

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