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    ANKRD13A ankyrin repeat domain 13A [ Canis lupus familiaris (dog) ]

    Gene ID: 609384, updated on 5-Mar-2024

    Summary

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    Official Symbol
    ANKRD13Aprovided by VGNC
    Official Full Name
    ankyrin repeat domain 13Aprovided by VGNC
    Primary source
    VGNC:VGNC:37884
    See related
    Ensembl:ENSCAFG00845020714
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See ANKRD13A in Genome Data Viewer
    Location:
    chromosome: 26
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 26 NC_051830.1 (17479956..17512486, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 26 NC_006608.4 (18634213..18666708)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 26 NC_049247.1 (17487197..17519707, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 26 NC_049286.1 (18843776..18876267)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 26 NC_049767.1 (17469736..17502237, complement)

    Chromosome 26 - NC_051830.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111092656 Neighboring gene uncharacterized LOC102152728 Neighboring gene U4 spliceosomal RNA Neighboring gene GIT ArfGAP 2 Neighboring gene trichoplein keratin filament binding

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ankyrin repeat domain-containing protein 13A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051830.1 Reference ROS_Cfam_1.0

      Range
      17479956..17512486 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038436957.1 → XP_038292885.1  ankyrin repeat domain-containing protein 13A isoform X1

      UniProtKB/TrEMBL
      A0A8C0P917
      Conserved Domains (3) summary
      sd00045
      Location:12 → 38
      ANK; ANK repeat [structural motif]
      pfam11904
      Location:156 → 475
      GPCR_chapero_1; GPCR-chaperone
      pfam12796
      Location:13 → 96
      Ank_2; Ankyrin repeats (3 copies)

    2. XM_038436958.1 → XP_038292886.1  ankyrin repeat domain-containing protein 13A isoform X2

      UniProtKB/TrEMBL
      A0A8C0P917, A0A8I3P8Q8
      Related
      ENSCAFP00845028576.1, ENSCAFT00845036517.1
      Conserved Domains (3) summary
      sd00045
      Location:12 → 38
      ANK; ANK repeat [structural motif]
      pfam11904
      Location:156 → 470
      GPCR_chapero_1; GPCR-chaperone
      pfam12796
      Location:13 → 96
      Ank_2; Ankyrin repeats (3 copies)

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049286.1 Alternate UMICH_Zoey_3.1

      Range
      18843776..18876267
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038511940.1 → XP_038367868.1  ankyrin repeat domain-containing protein 13A isoform X5

    2. XM_038511938.1 → XP_038367866.1  ankyrin repeat domain-containing protein 13A isoform X3

    3. XM_038511939.1 → XP_038367867.1  ankyrin repeat domain-containing protein 13A isoform X4

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049767.1 Alternate UNSW_CanFamBas_1.0

      Range
      17469736..17502237 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038639550.1 → XP_038495478.1  ankyrin repeat domain-containing protein 13A isoform X1

    2. XM_038639551.1 → XP_038495479.1  ankyrin repeat domain-containing protein 13A isoform X2

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049247.1 Alternate UU_Cfam_GSD_1.0

      Range
      17487197..17519707 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038575365.1 → XP_038431293.1  ankyrin repeat domain-containing protein 13A isoform X1

      UniProtKB/TrEMBL
      A0A8C0P917
      Conserved Domains (3) summary
      sd00045
      Location:12 → 38
      ANK; ANK repeat [structural motif]
      pfam11904
      Location:156 → 475
      GPCR_chapero_1; GPCR-chaperone
      pfam12796
      Location:13 → 96
      Ank_2; Ankyrin repeats (3 copies)

    2. XM_038575366.1 → XP_038431294.1  ankyrin repeat domain-containing protein 13A isoform X2

      UniProtKB/TrEMBL
      A0A8C0P917, A0A8I3P8Q8
      Conserved Domains (3) summary
      sd00045
      Location:12 → 38
      ANK; ANK repeat [structural motif]
      pfam11904
      Location:156 → 470
      GPCR_chapero_1; GPCR-chaperone
      pfam12796
      Location:13 → 96
      Ank_2; Ankyrin repeats (3 copies)

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006608.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      18634213..18666708
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022410306.2 → XP_022266014.1  ankyrin repeat domain-containing protein 13A isoform X1

      UniProtKB/TrEMBL
      A0A8C0P917
      Conserved Domains (3) summary
      cd00204
      Location:4 → 101
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00045
      Location:8 → 38
      ANK; ANK repeat [structural motif]
      pfam11904
      Location:156 → 475
      GPCR_chapero_1; GPCR-chaperone

    2. XM_846379.5 → XP_851472.1  ankyrin repeat domain-containing protein 13A isoform X2

      UniProtKB/TrEMBL
      A0A8C0L855, A0A8C0P5K6, A0A8C0P917, A0A8P0NCV8
      Conserved Domains (3) summary
      cd00204
      Location:4 → 101
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00045
      Location:8 → 38
      ANK; ANK repeat [structural motif]
      pfam11904
      Location:156 → 470
      GPCR_chapero_1; GPCR-chaperone
    Nucleotide Protein
    Heading Accession and Version

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